Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0088 ATGGCTTCTGGGGTAACTGCTTCTCTCTCCTTTCCCTCCTCCAAGTCCGCCTCTCTCTCAACCAGAACCTCCATTGTTGCCCCCGACAGACTAGTATTCAAGAGGGTTGCATTCCAATACAGGGATGTGTATAGCACTGGGAAAGTAGTTTCTATCAGAGCTCAAGTGACCACCACTGAGACAGAGGTGCCTGCTGCTAAGGTAGAGAAGGAATCGAAGAAACAGGAAGAAGGAGTGATAGTGAACAAGTTCAAACCCAAGAATCCTTACACCGGGAGATGCTTGCTCAACACTAAGATCACTGGGGACGATGCTCCTGGAGAGACATGGCACATGGTCTTCAGCACCGAGGGAGAGGTTCCATACAGAGAGGGACAGTCAATCGGAGTGATTCCAGATGGCCTTGACAAGAATGGCAAGCCTCACAAGCTCAGATTGTATTCCATTGCCAGCAGTGCTCTCGGTGACTTTGGTGACTCCAAAACTGTTTCTCTGTGTGTGAAACGGCTTGTGTACACTAACGAAAATGGAGAACTCGTCAAAGGGGTGTGCTCAAATTTCTTGTGTGATCTGAAGCCTGGAGCTGAAGTGAAAATCACAGGCCCTGTAGGGAAAGAAATGCTTATGCCTAAAGATCCTAATGCCACCATCATAATGTTGGCAACTGGAACTGGAATTGCTCCATTCCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCACGAGGATTACAAATTCAATGGTTTGGCATGGCTCTTTTTGGGGGTCCCCACGAGCAGCTCACTGCTTTACAAGGAGGAATTTGAGAAGATGAAGGAGAAAGCTCCCGAGAACTTCAGGCTTGACTTTGCTGTGAGCAGAGAGCAGACAAATGAGAAGGGGGAGAAGATGTACATCCAGACCAGAATGGCTCAATATGCAGAAGAGTTATGGCAACTGCTCAAGAAAGACAATACTTTCGTCTACATGTGTGGGTTGAAAGGAATGGAAAAGGGAATTGATGACATCATGGTCTCCTTGGCTGCAAGAGACGGTATTGACTGGGTTGAGTACAAGAGGCAATTGAAGAAGGCAGAGCAATGGAACGTGGAAGTCTATTAA 1101 0.4696 MASGVTASLSFPSSKSASLSTRTSIVAPDRLVFKRVAFQYRDVYSTGKVVSIRAQVTTTETEVPAAKVEKESKKQEEGVIVNKFKPKNPYTGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPDGLDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWQLLKKDNTFVYMCGLKGMEKGIDDIMVSLAARDGIDWVEYKRQLKKAEQWNVEVY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0088 366 PIRSF FNR-PetH 3 366 IPR035442 GO:0016491
Lele51g0088 366 Pfam Oxidoreductase NAD-binding domain 219 333 IPR001433 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 320 328 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 122 132 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 182 191 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 145 152 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 218 237 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 260 271 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 296 312 IPR001709 GO:0016491
Lele51g0088 366 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 257 IPR001709 GO:0016491
Lele51g0088 366 CDD CYPOR_like_FNR 82 366 - -
Lele51g0088 366 FunFam Ferredoxin--NADP reductase, chloroplastic 204 366 - -
Lele51g0088 366 PANTHER - 4 366 IPR015701 GO:0016491
Lele51g0088 366 Gene3D Translation factors 56 203 - -
Lele51g0088 366 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 87 209 IPR017927 GO:0016491
Lele51g0088 366 FunFam Ferredoxin--NADP reductase, chloroplastic 71 203 - -
Lele51g0088 366 SUPERFAMILY Riboflavin synthase domain-like 66 210 IPR017938 -
Lele51g0088 366 PIRSF Frd-NADP+_RD 1 366 IPR015701 GO:0016491
Lele51g0088 366 Gene3D - 204 366 IPR039261 -
Lele51g0088 366 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 212 366 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0088 Lele-ChrLele51 502595 504744 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0077 49 473123 475287 Lele51g0088 51 502595 504744 hybridization
Lele50g0093 50 579173 581223 Lele51g0088 51 502595 504744 hybridization