Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1743 ATGACGCTGTGGATAAGGGTCACCGGAGCTCTCAAAGACAAAGGGAGCATCTGGGTCGCCAAGTTCGCTCCGGCCACCATCCTCCGCAACCCCGTTCTCGAGACGGCCGTCATCAAAGCCACCAGCCACGATGAGCACCATATCGACTACAAGAACGTCGAGAGAGTCATGCAATGGCTCGCCGCCTCGCCGTTGCACCTCAAACCTCTCGTTTTCAGTCTCTCCCTGCGCATGAAGAAGACGCGGAGCTGGCCCGTCGCTCTCAAGGGCTTAATGCTCATGCATGGAATCTTCTGTTGTCAGATCCCCGCCCTACAGAAAATCGGACGCTTACCTTTCGATCTCTCCGATTTCACCGATCGCCATTCCAGATCTGATAAGGTATGGGCTTTCAACGCCTTCGTCCGTTCGTATTTCACGTATTTGGATCAGAGATCGGCGTTCGTGTCGTCGGAATACCAGAAGAAAAGCAAGCAGAGGAAGGAAATGGAGGACACGTTGATGCAGGAGCTGGAGAAATTGCAGAAGATGCAAACCCTAATTGATACAATACTCGAGATCAGGCCTCTGAACGGGCGAATGAATAACGTGGCCCTCATTCTGGAAGCCATGGATTGCGTTGTCGTGGAGCTTTCTGATATGTATGGTAAATTCGGTACAGAGATGACTCGAATTCTCCTGAGAATTTATGACATGGGAGGGAAAATGGAAGCGAATGTAGGGCTCCGTGTTGTGAAGAAAGCTGCAGTACAAGGGGAAGAACTTGCTTGTTACTTTGAGTTATGCAGAGAAATGGGGGTAGGGCATGCCTCTCGGAGCCCTAAAATTGAACGAATCTCTGAAGAAACCATTCGAACTCTGGAGCGAATGGCCAATGGGGATCACGAGAAGAAGATGATGAACAAGGTTGAGGACGATGAATGTGGTCGTGAGAAAAACGAAGAGGAGGCAATAGTAGTGTTATCAAAGCAAGGTTCATCGGGAACAGTGATCACAGAGAGATGGGAGATTTTTGAGGACGATAATACGTGTTTTAGCGATGGAAGTATTATTTCATCAAGCAACAACCCTTTTCTTGATGATTCATATACGCTAGTACCTTATAATTATCCAGTACCACCTCACAATCAAGCTCTTCCAGATTTAATTACTTTCTAA 1158 0.4793 MTLWIRVTGALKDKGSIWVAKFAPATILRNPVLETAVIKATSHDEHHIDYKNVERVMQWLAASPLHLKPLVFSLSLRMKKTRSWPVALKGLMLMHGIFCCQIPALQKIGRLPFDLSDFTDRHSRSDKVWAFNAFVRSYFTYLDQRSAFVSSEYQKKSKQRKEMEDTLMQELEKLQKMQTLIDTILEIRPLNGRMNNVALILEAMDCVVVELSDMYGKFGTEMTRILLRIYDMGGKMEANVGLRVVKKAAVQGEELACYFELCREMGVGHASRSPKIERISEETIRTLERMANGDHEKKMMNKVEDDECGREKNEEEAIVVLSKQGSSGTVITERWEIFEDDNTCFSDGSIISSSNNPFLDDSYTLVPYNYPVPPHNQALPDLITF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1743 385 FunFam Putative clathrin assembly protein 7 153 - -
Lele50g1743 385 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Lele50g1743 385 Pfam ANTH domain 33 290 IPR011417 GO:0005543
Lele50g1743 385 Gene3D - 10 152 IPR008942 -
Lele50g1743 385 Coils Coil 153 180 - -
Lele50g1743 385 Gene3D ANTH domain 154 307 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele50g1743 385 SUPERFAMILY ENTH/VHS domain 33 149 IPR008942 -
Lele50g1743 385 SUPERFAMILY GAT-like domain 169 290 - -
Lele50g1743 385 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 315 IPR045192 GO:0048268|GO:0072583
Lele50g1743 385 CDD ANTH_N_AP180_plant 33 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1743 Lele-ChrLele50 22173582 22174739 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1743 50 22173582 22174739 Lele51g1646 51 17469236 17470405 hybridization
Lele50g1743 50 22173582 22174739 Lele52g1705 52 20599022 20600173 hybridization