Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1515 ATGGTTCATAGAGAAGGCATGTATGCACAACCGCCTTCGACGATGGCGGCCACACCACTTTCCGCCATAGCCGAGGCCTTCGAGGAACTTGCCAAGTTCATCAATGGCGCTAAGAATAATGGGAACACAAAGCAAAAAGAGCTTCGCCTCGACAAATTTTGCCATGCTTGCTCTCACGTCTCTGTTCTCTTTAATTCCCTTGGCCTCGTTTTCAAATTCGCTGAATTAGAGTACATCTCCAAGCTTCATTCGCTCATGGATGCATCAAAGACATATGACACTTTAAAGGATATAATTGACCTTGATGTTGCAAATGGAACAGTGAAAACACAAGGCAGCCTTTCACGTTGTCTACGCAGAGTTCGGCAGGGTCTTCACCTAGTCAGAAGTATATTCGAACAGTTTTTGTTAACTGATGACAGTTCTCTAAAAGAAGTAGCTTCAACGGCTTATGCACAGGTTTGTGCTCCGTATCATTCATGGACAGTAAGAGCAGCGGTAGCTGCTGGCATGTATGCACTTCCAACAAGAGACCAATTGTTGGCGAGGCTTAATGAAACAAATCAGTCAGCTGAGAAGAAAATGTTCAGATACATCAACGCTTCAGTTCCAATTATAGAGTACATTGATAAACTATACCTGTCTCGAAATATTAGGTTGGACTGGTGA 669 0.435 MVHREGMYAQPPSTMAATPLSAIAEAFEELAKFINGAKNNGNTKQKELRLDKFCHACSHVSVLFNSLGLVFKFAELEYISKLHSLMDASKTYDTLKDIIDLDVANGTVKTQGSLSRCLRRVRQGLHLVRSIFEQFLLTDDSSLKEVASTAYAQVCAPYHSWTVRAAVAAGMYALPTRDQLLARLNETNQSAEKKMFRYINASVPIIEYIDKLYLSRNIRLDW 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1515 222 Coils Coil 181 201 - -
Lele50g1515 222 SUPERFAMILY Glycolipid transfer protein, GLTP 44 221 IPR036497 -
Lele50g1515 222 Gene3D Glycolipid transfer protein 13 222 IPR036497 -
Lele50g1515 222 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 17 212 - -
Lele50g1515 222 FunFam Accelerated cell death 11 12 222 - -
Lele50g1515 222 Pfam Glycolipid transfer protein (GLTP) 49 186 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1515 Lele-ChrLele50 20292692 20294748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1515 18 222 Acyl Lipid Metabolism Gene Families AT4G39670 65.854 1.83e-99 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1515 50 20292692 20294748 Lele50g1515 50 20292692 20294748 ECH
Lele50g1515 50 20292692 20294748 Lele52g1468 52 18677055 18679099 hybridization