Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1503 ATGAGTTCCGTCGTTCAGGGTTTCACCAAGTCTCTGGCTATGACTGTGCTCTCTGAAATCGGGGATAAAACATTTTTCGCTGCTGCGATCCTGGCTATGCGTTACCCCAGACGGCTTGTTTTGTCAGGTTGCCTATCAGCGTTGATTGTTATGACCATTCTATCTGCTCTTGTTGGATGGGCTGCTCCAAATCTGATTTCTCGTAAATGGACTCATCACATAACAACATTGTTGTTCTTTGGTTTTGGGCTATGGTCCTTGAAGGATGCGATATTTGAAGAAGGGGAGTCTGAAGAACTGGCTGAAGTAGAAGCAAAATTGGATGCGGATTACAAGGCTAATGGTGGATCCGCGAAACATAGCAATAAGGTTAATGATGACTTGAAAAAGCAGAAACGGCCCTTTTTCAGTCAGTTTTTCTCCCCCATATTTTTAAAGGCATTTTCTATCAACTTTTTCGGTGAGTGGGGTGACAAGAGCCAGCTGGCTACCATTGGTTTGGCTGCTGATGAGAATCCATTTGGTGTGGTTCTTGGCGGCATTGTTGGACAAGCGCTTTGCACTGCTGCTGCTGTTGTTGGAGGAAAGAGTTTGGCATCTCAAATATCTGAAAAAATAATTGCACTCTCAGGTGGAATTCTTTTCATTGTATTCGGTATCCAATCATTCCTTACTCCAGTTGAATGA 687 0.4367 MSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRRLVLSGCLSALIVMTILSALVGWAAPNLISRKWTHHITTLLFFGFGLWSLKDAIFEEGESEELAEVEAKLDADYKANGGSAKHSNKVNDDLKKQKRPFFSQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLGGIVGQALCTAAAVVGGKSLASQISEKIIALSGGILFIVFGIQSFLTPVE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1503 228 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 3 224 IPR001727 -
Lele50g1503 228 Pfam Uncharacterized protein family UPF0016 146 219 IPR001727 -
Lele50g1503 228 Pfam Uncharacterized protein family UPF0016 10 83 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1503 Lele-ChrLele50 20178398 20183832 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1503 50 20178398 20183832 Lele50g1503 50 20178398 20183832 ECH
Lele50g1503 50 20178398 20183832 Lele51g1332 51 9052345 9056334 hybridization
Lele50g1503 50 20178398 20183832 Lele52g1456 52 18568963 18573020 hybridization