Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0920 ATGGACGATAGTGAAGACGTATTCGAAGATTGGGAGGATGCGTTCTTGGACCAATTAATCCAGGTCGAAGAACTTGCTCTATCTGCTATTAAACCAAGTTCCAATCCTTCTCGTTCCCATAATCCTCCTCATCCGACCTCTTTATCAACTTCACACGTCCCTCCACAACCACCTCAATCTCGACACCACCACCTCCAACAACCGCCGCATTCCGTCGCGCCTTCTTCCTCCTATAATGCTGTCAGTTACTCGCCCCCACGAGAGCTCTCTCAGAGGAGCACGGATTCTGACTCTTTTCAACACTCTCCTAGGGGCCCTGCAAAATGTCCTTCTCTTGCGGATGCTCCGATTTTACGACGACCCGATAAAGACAAAGATCATGAAATCGAGCGGTTAAAGAGGGAGCTTGGACAAGCATCGAAGCAGCTCGCTCTCCTGGAAAAGGAGTGTCTTGAATTAAAGAAAGAAAGAGACATGAAAGATGAGCAGCTCAAATTTGGAGCTTTAAAGAATGAAGAAGAAAATGGACGTGCCAACCATTCAAAGAGTATAAACATCATCTGTACAAATTCTACTGAGCATGATGGCATGGAATGGAGAAATCTTGCTCCAGACCAACGTGGCATCTCTCAAAAAATTCAAAATAGAGAATCTTCAAAAATGCTGGCTGCTGAGTCAAGTTATAAAGCTACAGGAGTTCAAACAGACATAGACACCCAGAAAGAAGCTCAAAATATTCTGGATGGTGAGGTGCCAGCTTGTCTTGAACTTTCTGAGAAGTTGCTGGCAATTTGGGGCTCTTCGGATGAACAAAAGCTAGGAAGCAATATAACTGAAGGGACAGCTGTGTTGGAAACTCTGTTTGAACCATTACTTGATCTTTTTAGTGTTAAAAATGTTGTTGTAGTCCATAGCTCTCTATGCATACTGCATAGTTATCTGAAACTTCTATTGGAATTGGAAAAGGATTCTGGAAGAAGGGACAATGTGCTTGTTGAGGGAGTTTGCTTGGAGAACAATATTGTTGATTCTTGTGGACTTGAAGGTGTCAAAGATGGAAAACTCTCTTATATGCACACCAATGAGACATCTCATTCAGGGTGCAATCAGGTCCAGCCAGAATTGTTTGATGTAGAAATGCTAAGCAAAAGAAGGCGTTGGAACCATCGGAATTCCTTGCAGCCTCAAGTAAATTGGGTTTATCTTTTTGAAGCAATGCATCATATTGCTATGAAGATGACAGAGGAAAGTGTGAGAGTGGAAGCTGTATCCATCATGCATTTGATTCTTCTAAGAAGTAATGCTTACATTGATAGGGAACGGTTTGAACAAAAAATGGCATTTGATACCATTTCACAGTTGCTTAAAAGGGATGTTGGGTTACATGTGAAACAACATGCTCTGAGACTTTTGTACCTGCTTCTAAATTGTCCAAAACTATTGGTTACTTTCTGCTTTGGTTGCAAAGGGGGAGAGTGTGCTAGTGCTATGGATGACAATGCATCTACCTCAGATTCCCCGAAATTCAATATCATTCTTCAAGGTTTGGCAGATTGTGTTGCATCCCATGGAAGTGGATTACAGAGGTTGACCAAGAAGGATATTTCTGATGCGGGAGATACTAATATTGCTCAACAGACTGGTGTCCAGCCCTTCATACTCTGCAACCGTCTTGCGAGCTTTAACAAGCACCAGAGACATGGCCAGTCTGACAATTGA 1719 0.4264 MDDSEDVFEDWEDAFLDQLIQVEELALSAIKPSSNPSRSHNPPHPTSLSTSHVPPQPPQSRHHHLQQPPHSVAPSSSYNAVSYSPPRELSQRSTDSDSFQHSPRGPAKCPSLADAPILRRPDKDKDHEIERLKRELGQASKQLALLEKECLELKKERDMKDEQLKFGALKNEEENGRANHSKSINIICTNSTEHDGMEWRNLAPDQRGISQKIQNRESSKMLAAESSYKATGVQTDIDTQKEAQNILDGEVPACLELSEKLLAIWGSSDEQKLGSNITEGTAVLETLFEPLLDLFSVKNVVVVHSSLCILHSYLKLLLELEKDSGRRDNVLVEGVCLENNIVDSCGLEGVKDGKLSYMHTNETSHSGCNQVQPELFDVEMLSKRRRWNHRNSLQPQVNWVYLFEAMHHIAMKMTEESVRVEAVSIMHLILLRSNAYIDRERFEQKMAFDTISQLLKRDVGLHVKQHALRLLYLLLNCPKLLVTFCFGCKGGECASAMDDNASTSDSPKFNIILQGLADCVASHGSGLQRLTKKDISDAGDTNIAQQTGVQPFILCNRLASFNKHQRHGQSDN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0920 572 MobiDBLite consensus disorder prediction 27 122 - -
Lele50g0920 572 MobiDBLite consensus disorder prediction 28 57 - -
Lele50g0920 572 MobiDBLite consensus disorder prediction 63 101 - -
Lele50g0920 572 Coils Coil 129 163 - -
Lele50g0920 572 PANTHER ATR INTERACTING PROTEIN 277 530 IPR044952 GO:0006974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0920 Lele-ChrLele50 5797918 5804021 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0920 50 5797918 5804021 Lele50g0920 50 5797918 5804021 ECH
Lele50g0920 50 5797918 5804021 Lele51g0896 51 5505409 5513612 hybridization
Lele50g0920 50 5797918 5804021 Lele52g0901 52 5837380 5843670 hybridization