Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0886 ATGGCCGTCGAGGAGGTTGCCAGATCCCCGGAAGAAGCAGGAACCCCTGCTGTCAACGGCGCCGACCATGGGATAGTTGCCACGTACCCGTCTCCCCCAGCGGCGCCGAGTGACAGTCAGCCGCCACTCAAGGGTGATGCTGATAGCCAAGAGAAGCTAAGGACTGCACCAAACAGGCAGCACAGTACTGCAATGAGTCAGCACAATGAGAATGGCTACGTCACCGTTGATGGATTACCCTCCCCAAGGGCAAATAACTTGAAGAAAGTTTCAGTTCTTCCTCTCATATTCATCATCTTCTATGAGGTTTCTGGGGGCCCTTTTGGCGTAGAGGATACAGTGCAAGCTGCAGGTCCTCTGTTAGCCCTTCTTGGCTTCTTGGTTTTCCCATTCATATGGAGTGTTCCTGAAGCTTTAATTACTGCAGAAATGGGTACCATGTTCCCTGAAAATAGTGGCTATGTGGTTTGGGTTTCTTCTGCATTGGGTCCCTATTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTCAGTGGGGTAATTGATAATGCCCTATACCCAGTTCTCTTTCTTGATTATCTGAAATCTGATATCCCAGCTTTAGCCAGTGGCTTTCCAAGAATTGCTACAGCCTGGGGATTGACAATAATTCTCACATTTTTGAATTATATTGGTTTAACAATTGTAGGATGGGTTGCTATTCTTTTAGGAGTTTTCTCACTTCTTCCTTTTGTGGTTATGGGGTTCATGGCAATTCCAGACATAAAACCTTCAAGATGGTTGGTGGCAGATCTAAACAATGTAGATTGGAGTTTGTATCTGAACACTCTATTTTGGAATCTTAACTACTGGGATTCCATAAGTACTCTTGTTGGAGAAGTGAAAAACCCAAATAAAACTCTTCCAAAGGCTCTATTCTATGCTTTGATCCTAGTAGTTATAGGATACTTTTTCCCACTTCTTATCGGTACTGGTGCTGTTCCTCTCAATCGTTCATTGTGGACTGATGGATACTTTTCTGATATAGCCAAGATCATTGGAGGAGTTTGGTTGAGTTATTGGCTTCAAGGAGCTGCTGCAATGTCAAACATGGGTATGTTTGTTGCAGAGATGAGCAGTGATTCGTTTCAACTTCTGGGGATGGCAGAGAGAGGAATGTTACCTGAGTGCTTTAGCAAGAGGTCTCGATATGGAACTCCTCTTATAGGAATAATTTTCTCAGCTTCAGGTGTGATTTTACTGTCATGGTTGAGTTTTGATGAAATTGTTGCAGCTGAAAACTTCTTGTACTGCTTTGGGATGATTTTGGAGTTCATAGCATTCATATTGTTGAGGATCAGACACCCCAATGCATCTCGGCCTTACAAGATCCCAGGTGGAACAGTTGGAGCAATTCTTATATGTATACCTCCTACAATAACCATAGGTTTTGTGTTAGCTTTTTCTTCCCTCAAAATCTTCATCATAAGCCTCGTTGCTGTGTTCATTGGCCTTATACTTCAGCCTTGTCTTAAATTCGCAGAGAAAAAGAGATGGTTGAAGTTCTCAGTCAGTTCTGAGCTCCCAGATTTTGGCAACCAAGGGAGCAGCCATTATTTGATAGAATCATAG 1608 0.4353 MAVEEVARSPEEAGTPAVNGADHGIVATYPSPPAAPSDSQPPLKGDADSQEKLRTAPNRQHSTAMSQHNENGYVTVDGLPSPRANNLKKVSVLPLIFIIFYEVSGGPFGVEDTVQAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSDIPALASGFPRIATAWGLTIILTFLNYIGLTIVGWVAILLGVFSLLPFVVMGFMAIPDIKPSRWLVADLNNVDWSLYLNTLFWNLNYWDSISTLVGEVKNPNKTLPKALFYALILVVIGYFFPLLIGTGAVPLNRSLWTDGYFSDIAKIIGGVWLSYWLQGAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPECFSKRSRYGTPLIGIIFSASGVILLSWLSFDEIVAAENFLYCFGMILEFIAFILLRIRHPNASRPYKIPGGTVGAILICIPPTITIGFVLAFSSLKIFIISLVAVFIGLILQPCLKFAEKKRWLKFSVSSELPDFGNQGSSHYLIES 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0886 535 MobiDBLite consensus disorder prediction 1 77 - -
Lele50g0886 535 MobiDBLite consensus disorder prediction 56 74 - -
Lele50g0886 535 PANTHER POLYAMINE TRANSPORTER PUT1 68 525 IPR044566 GO:0022857
Lele50g0886 535 FunFam Amino acid permease, putative 86 515 - -
Lele50g0886 535 Gene3D Amino acid/polyamine transporter I 87 518 - -
Lele50g0886 535 Pfam Amino acid permease 94 493 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0886 Lele-ChrLele50 5571318 5573748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0886 65 530 Organic Solute Cotransporters AT1G31830 71.670 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0886 50 5571318 5573748 Lele50g0886 50 5571318 5573748 ECH
Lele50g0886 50 5571318 5573748 Lele51g0867 51 5318041 5320584 hybridization