Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0799 ATGTTGGAGGCCAAGCCCACTCTGGCCCCGACTCCGGCTCTGCTAATAGACCGACGAACGGGTGCGTCAATGATGGAGAATTTGGTTCCGGAGATTACAACCCATGCTTTGAGTTACTTGGATTATCCGAGTTTGTGTCGCCTCTCAATGACTAATTCTTTGATGCGGAAGGCTGCAAATGATGATAATGCATGGAAGGCTCTATATCACAAGGACTTCACGTTGGAACAAGATAGCGTTACACCAATTAATGGGTGGAAAGCTTACTATGCTGCCACAAGAGCGATTGTGAATATTAATGCAGAATTTTATAACATTGTCAGAGAGAAGTCTCTTCAAGCCATGAGTCGGTTTTGGCTGAATGCGGATTATGTGAAGTGCATTCATGCTTCAGGAGAACCATTTTCAGGGTACAATGCAGTAATGCAGAGTTGGCAGCTTGCGTTCAATTGGGAGCAAGGATTGAACTTTCAGGTGCGGGATGTACGTGCTAGGGTGTTGACGGACACGGCTTGGGTTACCATGAAAACTTATGTGGACATGGATACCGGTCCATTCAATGTGACTAACGTCTTTGAGTTTCATAACGGCCTCTGGTATATGGTTCTTCATCACAGCTCTGTGATGGACGGGGAAGTGGAGCAACAGATTGTACATGGATAA 663 0.457 MLEAKPTLAPTPALLIDRRTGASMMENLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPINGWKAYYAATRAIVNINAEFYNIVREKSLQAMSRFWLNADYVKCIHASGEPFSGYNAVMQSWQLAFNWEQGLNFQVRDVRARVLTDTAWVTMKTYVDMDTGPFNVTNVFEFHNGLWYMVLHHSSVMDGEVEQQIVHG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0799 220 PANTHER F-BOX PROTEIN SKIP8 14 219 IPR044260 -
Lele50g0799 220 Gene3D - 13 66 - -
Lele50g0799 220 SUPERFAMILY NTF2-like 91 209 IPR032710 -
Lele50g0799 220 ProSiteProfiles F-box domain profile. 22 68 IPR001810 GO:0005515
Lele50g0799 220 Pfam SnoaL-like domain 97 209 IPR037401 -
Lele50g0799 220 Gene3D - 89 216 - -
Lele50g0799 220 SUPERFAMILY F-box domain 21 104 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0799 Lele-ChrLele50 4915518 4918059 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0799 50 4915518 4918059 Lele50g0799 50 4915518 4918059 ECH
Lele50g0799 50 4915518 4918059 Lele51g0780 51 4714483 4717286 hybridization