Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0761 ATGCTAAAAGCGAAAGTTGCTGTATATGAAGAAAAGGTGGCAGGATTTGGTTCAAAAAAAAAACTGAGACCCATAGAAGTTTTTAAAGTGTTAGAGTTGGCTACTTCGAAGCTAGAAGATGCCCAAGTTAATTTTCTGAGCCGTGTGACTCAAATGGTGGAAGAAGTTCTGAATGCGAGAGATTGGATAAAGCAAAGAAAGCAAGAGATGAAACAACTGAAGAACAGCGTGGATGGTCTTACTGCTTCACTGAATGATAAAGAAGATACAGAAGGTGGGGAAGCTAGAGGCGAAGAAATTGAAGACAAAGTAAAAAGAATATTGAAGCTTATTGGAGATGACAATCATGAAGAGGATGGCAGCCCAGTACAATTTTCCAATAAGGAACCGCTTGTAGAACTAATTGAAGATTTCCACAATCAATACAAATCACTCTATGCTCGATATGACCATCTAACAGGAGAGTTGAGAAAAAAGATTAATGGAAAGCAAGGAAAGGAGAGTTCTTCATCTAGCTCAGACTCAGATTCAGATTACTCTTCAAAGGACAAAGACAGAAAAAATGGACAGCTGGAAAATGAATCCCAGAAGATAATTGATGGCCTAAAACAAGAACTTGAAATGAAATGTACAGAAGTTGAAGAATTAAGTAAAAAAGTGACTGTTATATGTGAAGAAAAGGAGGATCTAAATTCAACATGTCTTGCAGCCTTGAGCAAGATAGAAGAAGCAGGGAAAATCAACGCAGATTTGAAAACTGATGCCCAAACATTAGATAGTCAGAGATCAAAACTGTTGGCAGAGAATGGTGAACTAAAGAAGCAACTGGATAATGCTGGAGAGATTGAAGCTGAACTGAATCAAAGATTGGAATACTTGAAGAGAGAGAAAGATAATTTGACCCTAGAGAAAGAGACAGCTATAAGGCAGATTGATGAGGGACAGAAGATTACAGACAGCCTAAAAGCCACGGTCAGTCAGCTAAATGATGAGAAATTAGCCCTTGGAAAAGAACTAGAAGCTTTGACAGGGGAATTCTCCATTCTGAAGCAGCAATTCGAACAAGCAGAGCAGCAAGAGACAAATTTAAGCCATAATCTGAAAGTTGCTGAGGAAGAGAACGAATCGTTGAAGTTGAAACTTTCACAGCTTTCAAATGAGGTTCAGATTGCTCATGATAGGATACAAGAACTTGTAGCTGAATCAAATCAGTTAAAGGAGAGACTGAATGAGAGGGAAAAGGAAGTTTCAGACCTCACTCAAATGCATGAAGGGTATGAGAATGAATCCTTGAATAAAATCAGCGCATTAGAGGCGCAAGTCACAAACCTCAAGCTGGAATTGGAATCACTGCAAACACAGAAACAAGACCTGGAAGTGCAAATGACTAGTAGCACAACTGAAGTTAGAGAGCTGGTAGAGCAAAATTCAGGACTACAAAACCAAATTTCAGAACTAGAAATAAAGTTCAAAGAAAGAGAAAATGAACTGGCTGCTGTCATAAAGCATCTTGAAGATAATGAGAATAGCTTGTCATCTAAAATAGCTGATTTGACTTCTCAGATCAATAATCTGCTAACTGACGTAGATCAGCTACGTGCTCAGAAGGATAAACTGGAAGAGCGTGTATTATTTGAAAGTAATGAGGCATCAACTCAAGTTAAAAACATTACAGACCAGGTAAACGTATTGCAGCAGGAAGTAGAGTCCCTACAACACCAGAAATCTGACTTGGAAGTTCAACTTGCCAAAATGGTCCAAGAAAATTCAGAGCATGTGATTCATATACAAACTCTAAAAGAGGAGGTGGCCAGTAAGACTCTAGATCAAGAGAGGCTTGTGGAAGAAACAGAAAGATTAACCACGCAGATAAGGAAGCTGGAATCTGAGGTAGACATGGTAAAGGGCCAGAAGGGTGAAGTTGAAGAGCAAATGAGGATTAACAACGATGAGACCATACAATTGAGAGAGGAGAACTCAGGGCTAGATGACAAAATATCTGAAGTGGAGAAAAGATTAGCAGAGAGGGAGACTGAGATCTCTGCTCTTCAGGATAAACTTAAAAAAGTGGAGGATGAAGGTTCAACTCAAATAATGGCCTTAACATCACAGACTGACAATCTTCAACAAGATTTGGTTTCCCTGCATAATGAGAAGCAAGAATTGGCACAGCGGTGTGAAAAACTGAAGTTGGAGTTAGATTTCCTAAACAACAGCAAGAATGAATCTGAAGAGCAAATAAGAGCTACAGTCCATGAAAACAGTCAGCTGAAAGAGGAAATTTCGGGGCTACAAGAGAAAATTGCTGCCATGGAGAAAAATTTAGCAGAGAGGGAGACTGAGCTCTCTGCTCTTCAGGATAAATTTAAAAAAGCGGAGAATGAAGGTTCAACTCAAATAATGGCCTTAACATCACAGACTGACAATCTTCAACAAGATTTGGTTTCCCTGCATAATGAGAAGCAAGAATTGGCACAGCGGTGTGAAAAACTGAAGTTGGAGTTAGATTTCCTAAACAACAGCAAGAATGAATCTGAAGAGCAAATAAGAGCTACAGTCCATGAGAACAGTCTGCTGAAAGAGGAAACTTCCGGGCTACGAGAGAAAATTGCTGCCCTGGAGAACACTTTAGCAGAGAAAGAGGATGAGTTCTCTGCTTTACAGGACAAACTCGACAGCGAAAAGAATGAGGCTTCATCACAAATAATTGTCTTCACAACCCAGATCAAGAATCTGCAAGAGGACTTGCTTTCCTTGCAGAAAGAGAAAGAAGAATCGACGCTTCACCATGATAGAGTTAGAGAAGAACATGCAGAAAACTCGGCCTTGCTAAAGAATGAAAAGAAGGAGCTAGCTAGCAAAATTTCGGATCATCAGAGAATGCTGGAAGAACGAGAAGATGCATATCAGAAGTTAAATGAAGAATATAAACAAGTTGAGAGTTGGCTTCAGGAATGTAAGGTGAAACTTGAAGTTGCAGAAAAGAAGGTTGAAGAAATGACAGAAGAGCTTCATAGTGGCATTGAATCAAAGGATCAGATTGTAAGTGATTTGGAACAAACAGCAGAAGACTTGAGAAGGGATTTGGAACTCAAGACAGATGAAATCGGTACTTTGCTTGAGAACATCCGAAATATCGAGGTCAAACTTCGTCTGTCAAACCAGAAGCTTCGGGTCACAGAACAATTGCTAAGTGAGAAGGAAGAGGACTTTAGAAAGGCGGAAGAGAAGTACCAGGCAAATCAGAGAAAACTTGAAGACAGGATTGCTACATTGTCAGGAATAATTGCTGCTAATAATAAGGCCTATCAGGAAACGGTCAGTAACATCAAAGAGAGCATGAGGGGGGTGATGACTGGCATGGATACCGTAATCGGGAAATTTTCCGATGACCACAGAAACTATGAGAGTCGTATTTCAAACATCTCAAATGAGCTTCAGATAGCAAAGGACTGGATTAGAGAGATGAATGAGAAAAGAGAGAAGTTGAAGAAGGACAGACACCATCTGGGGGAGCAGCTGCAGGAAAGAAATGAAAAGGAATTGGCTTTGAGAGAGATGGTTCAGACGCTGGAGTTAAAGGCTAGCAAGGAAGAACTGGAGAACAAAAATCTGACGACAAGAGTGGTTCAACTGGAGAAGTCAGTAGCAGGACTAGAGCAAATGGTAAAAGATAAGGACGAAGGGATACTTGGCTTGGCGGAAGAGAAAAGAGAGGCCATCAGGCAGCTGTGTGTGTGGATTGATTACCATCGCAGTCGTTGTGATTATCTCAAGGTCATTATATCCAAGACTCCCAGATTTCAGAGAGCAAGGTGA 3819 0.4022 MLKAKVAVYEEKVAGFGSKKKLRPIEVFKVLELATSKLEDAQVNFLSRVTQMVEEVLNARDWIKQRKQEMKQLKNSVDGLTASLNDKEDTEGGEARGEEIEDKVKRILKLIGDDNHEEDGSPVQFSNKEPLVELIEDFHNQYKSLYARYDHLTGELRKKINGKQGKESSSSSSDSDSDYSSKDKDRKNGQLENESQKIIDGLKQELEMKCTEVEELSKKVTVICEEKEDLNSTCLAALSKIEEAGKINADLKTDAQTLDSQRSKLLAENGELKKQLDNAGEIEAELNQRLEYLKREKDNLTLEKETAIRQIDEGQKITDSLKATVSQLNDEKLALGKELEALTGEFSILKQQFEQAEQQETNLSHNLKVAEEENESLKLKLSQLSNEVQIAHDRIQELVAESNQLKERLNEREKEVSDLTQMHEGYENESLNKISALEAQVTNLKLELESLQTQKQDLEVQMTSSTTEVRELVEQNSGLQNQISELEIKFKERENELAAVIKHLEDNENSLSSKIADLTSQINNLLTDVDQLRAQKDKLEERVLFESNEASTQVKNITDQVNVLQQEVESLQHQKSDLEVQLAKMVQENSEHVIHIQTLKEEVASKTLDQERLVEETERLTTQIRKLESEVDMVKGQKGEVEEQMRINNDETIQLREENSGLDDKISEVEKRLAERETEISALQDKLKKVEDEGSTQIMALTSQTDNLQQDLVSLHNEKQELAQRCEKLKLELDFLNNSKNESEEQIRATVHENSQLKEEISGLQEKIAAMEKNLAERETELSALQDKFKKAENEGSTQIMALTSQTDNLQQDLVSLHNEKQELAQRCEKLKLELDFLNNSKNESEEQIRATVHENSLLKEETSGLREKIAALENTLAEKEDEFSALQDKLDSEKNEASSQIIVFTTQIKNLQEDLLSLQKEKEESTLHHDRVREEHAENSALLKNEKKELASKISDHQRMLEEREDAYQKLNEEYKQVESWLQECKVKLEVAEKKVEEMTEELHSGIESKDQIVSDLEQTAEDLRRDLELKTDEIGTLLENIRNIEVKLRLSNQKLRVTEQLLSEKEEDFRKAEEKYQANQRKLEDRIATLSGIIAANNKAYQETVSNIKESMRGVMTGMDTVIGKFSDDHRNYESRISNISNELQIAKDWIREMNEKREKLKKDRHHLGEQLQERNEKELALREMVQTLELKASKEELENKNLTTRVVQLEKSVAGLEQMVKDKDEGILGLAEEKREAIRQLCVWIDYHRSRCDYLKVIISKTPRFQRAR 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0761 1272 Coils Coil 934 1042 - -
Lele50g0761 1272 Coils Coil 199 219 - -
Lele50g0761 1272 Coils Coil 325 496 - -
Lele50g0761 1272 Coils Coil 902 929 - -
Lele50g0761 1272 MobiDBLite consensus disorder prediction 177 196 - -
Lele50g0761 1272 MobiDBLite consensus disorder prediction 159 196 - -
Lele50g0761 1272 Gene3D - 251 428 - -
Lele50g0761 1272 Gene3D - 429 576 - -
Lele50g0761 1272 Gene3D - 674 767 - -
Lele50g0761 1272 Pfam KIP1-like protein 98 150 IPR011684 GO:0003779
Lele50g0761 1272 Coils Coil 255 310 - -
Lele50g0761 1272 Coils Coil 659 693 - -
Lele50g0761 1272 PANTHER COP1-INTERACTIVE PROTEIN 1 715 830 - -
Lele50g0761 1272 Coils Coil 1188 1222 - -
Lele50g0761 1272 SUPERFAMILY Tropomyosin 312 550 - -
Lele50g0761 1272 Coils Coil 800 897 - -
Lele50g0761 1272 Coils Coil 501 588 - -
Lele50g0761 1272 Coils Coil 1057 1084 - -
Lele50g0761 1272 MobiDBLite consensus disorder prediction 923 947 - -
Lele50g0761 1272 Coils Coil 63 90 - -
Lele50g0761 1272 SUPERFAMILY Tropomyosin 825 1094 - -
Lele50g0761 1272 Coils Coil 1146 1180 - -
Lele50g0761 1272 Coils Coil 596 644 - -
Lele50g0761 1272 Coils Coil 698 795 - -
Lele50g0761 1272 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 76 156 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0761 Lele-ChrLele50 4686110 4694234 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0761 50 4686110 4694234 Lele50g0761 50 4686110 4694234 ECH
Lele50g0761 50 4686110 4694234 Lele51g0741 51 4491601 4493949 hybridization
Lele50g0761 50 4686110 4694234 Lele52g0747 52 4734196 4735123 hybridization