Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0683 ATGAGACGTGTTAACGGGGATTATCGACCCGTTAACAATACTTTTGATACTATAAACGCTGCTGCCACTGCGATCGCCACCGCCGATAATCGACTTCCTCCACCATCTGTCCAGAAGAAAAGATGGGGAAGCTGCTTGAGCATATCTTTGTGTTTTGGATTTTTGAAAAACCGAAAGCGAATTGGGCATGCCGTCCTTGTTCCCGAAACAACACCTCCTGCTGCTGCCGGTAGTGATGGTGCTGCTGGTGCTCCGGCTACTACAGCTGCAAATTCAACCCAACCAACCAGTGTAGCACTTCCCTTCATTGCACCTCCTTCATCTCCTGCATCTTTCCTTCAATCAGAACCTCCTTCTGCAATGCAGTCACCGGTTGGTACAGTATCATTCACTCCTGTATCTGCTAGTATGTACTCTCCAAGTGGCCCTGCCTCCATATTTGCAATTGGCCCTTATGCTCATGAAACCCAATTAGTTTCACCTCCTGTTTTCTCCACCTTTACCACTGAACCATCAACTGCTCCTTTGACTCCACCTCCCGAGTCTGTCCACTTGACTACACCTTCTTCGCCGGAGGTGCCATTTGCTCAGCTGCTTGACCCTAACCTCAGGAACGGTGAGACTTTTCAGAAATTCCAAATATCTAACTATGACTTCCACTCTTATCAGCTACATCCTGGTAGCCCAATTGGTCAACTCATTTCTCCAAGATCTGGCGTCTCAGTTTCTGGCACCTCATCCCCTTTCCTTGATTCTGAATTAACTGCAGCTGGCACGCATGTCCTTGACTTCCAGACTGGAGACCCTCCCAAGCTTCTAAATTTTGATAAATTTTCCACTTCTGAAAACCGGAGGTCCTATCAGGGTTCTGGATCTTTAACCCCAGATGCTATGAGGTCCACAACTCAAGATGGTTTCCTTGCACAACATCGGATTTCTGAGAAGAAAATGACCCCAGGTATCCCAAATCGAAGCAGTAATTGTCTGAATGTAAACCATAGAGTCTCATTTGAATTAGCCGCCCAAGAATTATTGAGATGCTTGCAGAACAAACCAGTGGTATTAGCTAGAGCAGTACCGAAAGCGAAAAGTGATGCAGCAAAAGAAGAGAAAGATGAGAATTCCAGAGAAACTGGGAGTGATGACAAAGTCCCCGTTGCTGAAACTACTAATGATGAGGAGAAGATCGCAGGGAATGGAGACGAGGACATGGATAATCAGAATCCTCCATCGCTAACCCTTTCTTCTTCTTCCAAGGAATTCAATTTTGACAATGCAGATGGAGGGGATTCTCATGCACCCAATGTAGTCGTAGATTGGTGGGCCAATGAGAAAGTTATAGGAAAGGAAGGAGAACCCTCCAAGAATTGGTCTTTCTTCCCAATGATTCAACCTGGTGTGAGCTAA 1407 0.4606 MRRVNGDYRPVNNTFDTINAAATAIATADNRLPPPSVQKKRWGSCLSISLCFGFLKNRKRIGHAVLVPETTPPAAAGSDGAAGAPATTAANSTQPTSVALPFIAPPSSPASFLQSEPPSAMQSPVGTVSFTPVSASMYSPSGPASIFAIGPYAHETQLVSPPVFSTFTTEPSTAPLTPPPESVHLTTPSSPEVPFAQLLDPNLRNGETFQKFQISNYDFHSYQLHPGSPIGQLISPRSGVSVSGTSSPFLDSELTAAGTHVLDFQTGDPPKLLNFDKFSTSENRRSYQGSGSLTPDAMRSTTQDGFLAQHRISEKKMTPGIPNRSSNCLNVNHRVSFELAAQELLRCLQNKPVVLARAVPKAKSDAAKEEKDENSRETGSDDKVPVAETTNDEEKIAGNGDEDMDNQNPPSLTLSSSSKEFNFDNADGGDSHAPNVVVDWWANEKVIGKEGEPSKNWSFFPMIQPGVS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0683 468 MobiDBLite consensus disorder prediction 404 424 - -
Lele50g0683 468 MobiDBLite consensus disorder prediction 359 434 - -
Lele50g0683 468 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 9 468 IPR040420 -
Lele50g0683 468 MobiDBLite consensus disorder prediction 362 401 - -
Lele50g0683 468 MobiDBLite consensus disorder prediction 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0683 Lele-ChrLele50 4199831 4202466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0683 50 4199831 4202466 Lele50g0683 50 4199831 4202466 ECH
Lele50g0683 50 4199831 4202466 Lele51g0670 51 4057764 4060435 hybridization
Lele50g0683 50 4199831 4202466 Lele52g0674 52 4263032 4265693 hybridization