Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0456 ATGGCAACCTCTAATCTTCCATCTGGATTCTCCATGTTGAAGTCCGACCCCACTAGGCATTCTGACCTCTGCACTTCAAAATATCTGGGCCAGCTTTTATTTGATACTAAATACACGATAAAATGCATCCGGCGGCAAGCTTTCGCCGTGCCCTCGATGAAAATCGTCGAGCAGAGTCAGAATAGCGAACTCATATCTTCCAATGGTTACGCGACCGTTGACCAGACAAATTCTTCTTTTGAGCCGAAGCCTAGTAGCTTTGCTTCAGGGCTGGCAGAGGCAAATTTGAATGCACTCAGAAAAACTAAGATTGTTTGTACGATAGGTCCTTCTACCAGCTCACGTGAAATGATATGGAAACTGGCTGAAGCTGGAATGAATGTGGCACGCTTAAATATGTCACATGGAGAGCATGCATCGCACCAGAAAACCATTGATTTGGTAAAAGAATACAATTCTCAATTTGCAGATAAGGTTATAGCTATAATGCTTGACACCAAGGGTCCTGAAGTTAGAAGTGGGGATGTTCCTCGACCAATTGTGCTAAAAGAGGGCCAAGAATTCAATTTCACTATTAAAAGAGGGGTCTGCACAAATGACACAGTTAGTGTAAATTATGATGATTTTGTTAATGATGTGGAGGTTGGAGATATACTATTGGTTGATGGTGGAATGATGTCACTTGCTGTTAAGTCAAAGACAAAGGACTTGGTTAATTGTGAAGTGATTGATGGTGGAGAATTGCAATCAAGGCGTCACTTAAATGTCCGTGGAAAAAGTGCAACACTTCCTTCCATAACTGAAAAAGACTGGGAGGATATCAAGTTTGGGGTAGACAATCAGATCGACTTCTATGCTGTCTCATTTGTAAAGGACGCTAGAGTGGTTCATGAGTTGAAAAACTACCTGGAAAGTCGCAATGCTGATATACACGTGATTGTAAAAATTGAAAGTGCTGATTCAATACCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGAGACCTTGGGGCTGAACTTCCAATAGAAGAAGTTCCTTTATTGCAGGAGGACATCATTAAAAGATGTCACAGCATGCAAAAGCCAGTAATTGTGGCCACTAATATGCTGGAAAGCATGATCGGTCACCCTACACCAACAAGAGCAGAAGTTTCAGACATTGCAATTGCAGTAAGAGAAGGTTCTGATGGAATTATGCTTTCAGGAGAAACTGCCCATGGAAAATATCCACTGAAAGCTGTGAAAGTAATGCATACAGTGGCACTATGGACTGAGTCAAGCGTTCCAAGTAGTGTCGCTCCTCCCAATCAATTAAGTTCCCATGAGCGCCATATGGGAGAAATGTTTGCTTTCCATGCAACAATTATGTCTAACACCCTTAATAATCCTGTAATTGTTTTTACTAGAACAGGATCCATGGCTATTCTCTTGAGCCATTATAGGCCTCATTCGACAATCTTTGCATTTACAAATGAAGAAAGGATCAAGCAGAGGCTTGCGCTTTATCATGGTGTCCTGCCCATATACATGCAATTTTCAAATGATGCAGAGGAAACCTTCCGCAGAGCTCTCAAGCTACTGTTGAGTAAGGGTCTTGTAGAGGAGGGACAGTACGTTACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACTCACCACATACAAGTTCGTAGGCTTCTGGGATGA 1716 0.4231 MATSNLPSGFSMLKSDPTRHSDLCTSKYLGQLLFDTKYTIKCIRRQAFAVPSMKIVEQSQNSELISSNGYATVDQTNSSFEPKPSSFASGLAEANLNALRKTKIVCTIGPSTSSREMIWKLAEAGMNVARLNMSHGEHASHQKTIDLVKEYNSQFADKVIAIMLDTKGPEVRSGDVPRPIVLKEGQEFNFTIKRGVCTNDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVNCEVIDGGELQSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQIDFYAVSFVKDARVVHELKNYLESRNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIKRCHSMQKPVIVATNMLESMIGHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKYPLKAVKVMHTVALWTESSVPSSVAPPNQLSSHERHMGEMFAFHATIMSNTLNNPVIVFTRTGSMAILLSHYRPHSTIFAFTNEERIKQRLALYHGVLPIYMQFSNDAEETFRRALKLLLSKGLVEEGQYVTLVQSGAQPIWREESTHHIQVRRLLG 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0456 571 TIGRFAM pyruv_kin: pyruvate kinase 100 567 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 433 IPR015813 GO:0003824
Lele50g0456 571 FunFam Pyruvate kinase 265 430 - -
Lele50g0456 571 Pfam Pyruvate kinase, barrel domain 100 436 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 ProSitePatterns Pyruvate kinase active site signature. 310 322 IPR018209 GO:0004743|GO:0006096
Lele50g0456 571 Pfam Pyruvate kinase, alpha/beta domain 470 549 IPR015795 -
Lele50g0456 571 Gene3D - 431 549 IPR036918 -
Lele50g0456 571 PANTHER PYRUVATE KINASE 89 547 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 SUPERFAMILY PK C-terminal domain-like 418 568 IPR036918 -
Lele50g0456 571 SUPERFAMILY PK beta-barrel domain-like 169 260 IPR011037 -
Lele50g0456 571 Gene3D - 169 264 IPR015806 GO:0004743|GO:0006096
Lele50g0456 571 Gene3D - 100 430 IPR040442 -
Lele50g0456 571 PRINTS Pyruvate kinase family signature 312 338 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 PRINTS Pyruvate kinase family signature 282 296 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 PRINTS Pyruvate kinase family signature 364 388 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 PRINTS Pyruvate kinase family signature 158 174 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 PRINTS Pyruvate kinase family signature 389 407 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 PRINTS Pyruvate kinase family signature 408 424 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 PRINTS Pyruvate kinase family signature 339 363 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g0456 571 FunFam Pyruvate kinase 170 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0456 Lele-ChrLele50 2622101 2627983 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0456 50 2622101 2627983 Lele51g0436 51 2532730 2538133 hybridization
Lele50g0456 50 2622101 2627983 Lele52g0453 52 2691139 2697020 hybridization