Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0240 ATGGCCACTTCAGTGAAATCCAGTCCCAATACTCTCGACTTCGGCACCAATGGTCGAACCCCAACGATCGAGACTCAAAAAATGTCTATCTACGAGCAGTCCAGAGAGCAAAGAATCAGAGAAATCCGAGACCCCTTCGCCGCTCTTCTAGTTGTACTGGTGCAGTGTTATCCTGAAAATATTTGGATTGATGATCAGAATGTGGTACCAGTGAGTTACTCTGAAGTGCCTCAAAAGAAAGATGAATCTCTTGAAAATGGAAAGTTTGTGACAGATGCAGATTCAAAGCCAGAAATTTACACCGAAGAACATGAGAAGCTGCTGGGTAACACGGAGAAGCCCTGGACATTGTTCGTGGATGGGTATGGGAAGGATGGGAAACGAATATATGATTCCATCAACGGGAAAACTTGCCATCAGTGCAGGCAAAAAACCCTGGGCTATTGTACTCAGTGTAGCCAATGCAACATGGTCTATGGGGAATTTTGTGGAGATTGCTTGTACACGAGTTCTAGTTTTGCCTTAATTGGTGCATTCTCCGTATATGAGGTATCATCATTAGGCTACAAATCAGTTGCACACTATCTCATTCAGACCCGTCGCGCTGGTGCAAATGTGGAGGAAAATGCAGAAGCTTCCGTCCCAGTTTCAGCAGAGAAGTCACTGCCCTTCTCAGACGTAGGAGGGTTATCTAATGAGTCTCTTGAGCATGACAGGGATGAATGTTTGGATGCTATGAAACATCAATCGGGAAATGATAGGGAACAAGTTTCAGCAAAGAGATCATTGCCCTTTTCTGATGTGAAAGTGCAAGATCAGGATGAAACGGTTGCCTGCTCGGATTCAATGATCGCAAGTGCGTCTTCTACCCAAGTGAAAGACTGTATTGCTAGAAGACTTAGGCCCAGGGTTCCAAAATCACGAACGAATTTCAAAATGGAAGATGATTCTCACGACTTCATCACTGTTAATCTTAAAAATGATATGCTTCCTGTTTTAAGCTATTCCATTTCTTTTACAGCTATTGAAACAGAACCAACGGGATCCGAGGAATTTGGGGACAATCCATATGAAAAGGCATAG 1083 0.4358 MATSVKSSPNTLDFGTNGRTPTIETQKMSIYEQSREQRIREIRDPFAALLVVLVQCYPENIWIDDQNVVPVSYSEVPQKKDESLENGKFVTDADSKPEIYTEEHEKLLGNTEKPWTLFVDGYGKDGKRIYDSINGKTCHQCRQKTLGYCTQCSQCNMVYGEFCGDCLYTSSSFALIGAFSVYEVSSLGYKSVAHYLIQTRRAGANVEENAEASVPVSAEKSLPFSDVGGLSNESLEHDRDECLDAMKHQSGNDREQVSAKRSLPFSDVKVQDQDETVACSDSMIASASSTQVKDCIARRLRPRVPKSRTNFKMEDDSHDFITVNLKNDMLPVLSYSISFTAIETEPTGSEEFGDNPYEKA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0240 360 MobiDBLite consensus disorder prediction 1 21 - -
Lele50g0240 360 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 130 169 IPR018866 -
Lele50g0240 360 PANTHER OS05G0300700 PROTEIN 20 168 IPR040221 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0240 Lele-ChrLele50 1429420 1432904 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0240 50 1429420 1432904 Lele51g0243 51 1380056 1382646 hybridization
Lele50g0240 50 1429420 1432904 Lele52g0244 52 1447140 1450865 hybridization