Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0207 ATGGGCAAAGGAGGAGGTTGCGTTCCCAGCAAGAAGAATGCGCGCGAGGCCGCCGCCGGAGCATCCAGCAATAATAATGCACCGATAATTGTAGATGATCATGATACAAACTCAATGCTTTTTGGAAGTGGGTTGCAACTGTTAGCAGATTCTTTTCAAGCTACTTCTGCTAGAGATTCTAGAATAATTTTAACTCTTCCGAGAACTGAATTAATTACCAATTCTGGCGAAGATTCTATCCAACTCTTGGACAGCAATCACCCAGCTGGCACACCATGGAATGCTATTTGTTCCTATTGGATACACATTGGAAACGGGTATGTTAAAGATGGACTCCATCAGAGGGGGGCTCTCCACATGGTGCTGGTGTCTTTGCCGGGGACGGCACCAGAGAGCCAAGTGAAACAGAGCTCGCACTTGCAGAGCATCAAGGCAAGAAATCGATTCTTTTGGGTGAGCATTTCTCGCTTCGATTTTCATTATATATACCTACATAAGGATGATTCCATCACTCGTTACTCCCAAACTGAAGGTGCCAGAGTAATCGCAAAACTTATCACAGAAATGGCGGACACTCTCTCTGCCTTGCGGTCTCTAATGGCTTCCCACTCCCCGCCTCTTGATGCCTTGGTCATACCCTCCGAAGATTATCACCAGAGCGAATATGTATCTGCACGAGACAAAAGGCGCGAATTTGTATCCGGATTCACTGGAAGTGCTGGATTGGCACTCATTACAATGAAAGAAGCACTGCTGTGGACCGATGGACGGTATTTCTTGCAGGCAACACAAGAACTTAGGGATCAGTGGAAGCTAATGCGCATTGGTGAAGATCCTGCTGTAGATATCTGGATGGCTGATAACTTGCCGAATGATGCGTCCATTGGAGTTGACCCTTGGTGCATTTCAATTGATACAGCCCAAAGATGGGAGCGTGCTTTTGCTGTAAAACAGCAGAAGCTGGTTCAGACCACAAAAAATTTGGTAGATGAAGTATGGATTAACCGACCACCTGCAGAGATTAATGCTGTTATTGTACACCCATTGGAATTTGCAGGTCGTTCTGTTGCGGATAAGTTGGAATTTTTGAGAGAAAAGCTTAGGCTTGAAAAAGCTTGTGGTATAATTTTCACAGCGCTTGATGAGGTTGCATGGTTGTACAACATTCGTGGGAGTGATGTGGCTTACTGCCCCGTAGTTCACGCATTTGCTATTGTGACGTCCAATTCAGCTTTCTTTTATGTGGACAAGCGAAAGGTGTCTGCTGAGGTCAAAACTCATTTAGAAGGTAATGGAATTGAAATTAGAGAGTACATGGCAGTGAGTTCCGATGTGGCATTGCTTGCAGTAGATGAACTTGATGCTGTGTCTACTGTTAGAGGAACTTCAACTGAACTTACAGAGGAAGCAAGCAAAACTCTCAGTGGGACTGGCGTAAGAGTAAATGGTAGTTCTCAAGCAGATGCTAGTACTAATGACCTCATATGGGCTGATCCGGGTTCATGCTGCTATGCACTGTATTCAAAATTGAACCCTGATAATTCATCAAAAAGAGACAAGAAATTGAACCCTGACAAGGTTCACTTGCAGCAATCACCTGTGGCCTTGGCAAAAGCTTTAAAGAATCCAGTGGAATTGGAAGGTTTAAGAAAGGCACATATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTCTGGTTGGATGAGAAGATGAAGGATAATTATGGCGCATCTGGTTACTTTATGGAGGGTCATGAAGTGAACAAGGAAAAACATTTGAAGTCCTTGAAGCTGACTGAGGTGACTGCAAGTGACAAACTTGAGGCTTTTCGGGCATCAAAAGAGAATTTCAGAGGATTGAGTTTCCCAACTATTTCTTCAGTTGGACCAAATGCAGCTATCATTCATTATTGTCCACAGGCAGAAACGTGTGCTGAGCTTGATCCAGACAAGATGTATCTTTTTGATTCTGGAGCCCAGTATCTAGATGGAACAACTGATATAACACGAACAGTTCATTTTGGAAAACCTTCAACACATGAGAAAGCATGCTATACAGCAGTCCTCAAGGGTCACATTGCTCTTGGGAATGCTAGGTTTCCTAATGGGACAAATGGTCATTCACTTGATATTCTTGCCCGAGTTCCTCTGTGGAAAGATGGCCTTGATTATCGGCATGGTACTGGTCATGGCATTGGGTCTTACCTGAATGTTCATGAAGGACCCCATTTAATCAGTTTCAGACCACAAGCTCGGAATGTACCATTGCAAGCTTCAATGACTGTGACAGATGAGCCTGGTTACTATGAAGATGGAGAGTTTGGGATAAGATTGGAGAATGTGCTTATTGTCAATGAGGCTGATACAAAATTCAATTTTGGTGATAAAGGATATTTATCATTTGAACACATTACTTGGGCCCCTTACCAGAAGAAGTTGATTGACCCGAGCCTTCTTGCGCCTGATGAGATAGAATGGCTGAACTCTTATCACTCTAAATGTAGAGACATGCTGGCGCGATACTTGAATGAAGCTGAAAATGAATGGCTGAAGAAGGCCACTGAGCCTCTCACCGTGTGA 2580 0.4391 MGKGGGCVPSKKNAREAAAGASSNNNAPIIVDDHDTNSMLFGSGLQLLADSFQATSARDSRIILTLPRTELITNSGEDSIQLLDSNHPAGTPWNAICSYWIHIGNGYVKDGLHQRGALHMVLVSLPGTAPESQVKQSSHLQSIKARNRFFWVSISRFDFHYIYLHKDDSITRYSQTEGARVIAKLITEMADTLSALRSLMASHSPPLDALVIPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMKEALLWTDGRYFLQATQELRDQWKLMRIGEDPAVDIWMADNLPNDASIGVDPWCISIDTAQRWERAFAVKQQKLVQTTKNLVDEVWINRPPAEINAVIVHPLEFAGRSVADKLEFLREKLRLEKACGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFFYVDKRKVSAEVKTHLEGNGIEIREYMAVSSDVALLAVDELDAVSTVRGTSTELTEEASKTLSGTGVRVNGSSQADASTNDLIWADPGSCCYALYSKLNPDNSSKRDKKLNPDKVHLQQSPVALAKALKNPVELEGLRKAHIRDGAAVVQYLVWLDEKMKDNYGASGYFMEGHEVNKEKHLKSLKLTEVTASDKLEAFRASKENFRGLSFPTISSVGPNAAIIHYCPQAETCAELDPDKMYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGEFGIRLENVLIVNEADTKFNFGDKGYLSFEHITWAPYQKKLIDPSLLAPDEIEWLNSYHSKCRDMLARYLNEAENEWLKKATEPLTV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0207 859 Pfam Metallopeptidase family M24 548 786 IPR000994 -
Lele50g0207 859 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 726 738 IPR001131 -
Lele50g0207 859 Pfam Creatinase/Prolidase N-terminal domain 193 330 IPR000587 GO:0016787
Lele50g0207 859 CDD APP 548 794 IPR033740 GO:0070006
Lele50g0207 859 FunFam Xaa-Pro aminopeptidase P 539 857 - -
Lele50g0207 859 Pfam C-terminal region of peptidase_M24 798 857 IPR032416 -
Lele50g0207 859 Pfam Creatinase/Prolidase N-terminal domain 335 545 - -
Lele50g0207 859 FunFam Xaa-pro aminopeptidase P 186 333 - -
Lele50g0207 859 Gene3D Creatinase/methionine aminopeptidase superfamily 539 858 IPR036005 -
Lele50g0207 859 Gene3D - 334 523 IPR029149 -
Lele50g0207 859 SUPERFAMILY Creatinase/aminopeptidase 542 823 IPR036005 -
Lele50g0207 859 PANTHER XAA-PRO AMINOPEPTIDASE 1 188 857 - -
Lele50g0207 859 SUPERFAMILY Creatinase/prolidase N-terminal domain 229 321 IPR029149 -
Lele50g0207 859 Gene3D - 185 333 IPR029149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0207 Lele-ChrLele50 1217515 1229269 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0207 50 1217515 1229269 Lele51g0207 51 1168105 1175246 hybridization
Lele50g0207 50 1217515 1229269 Lele52g0210 52 1239191 1249538 hybridization