Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0183 ATGCTGCCGTTGACCCCCTCGAAATTTATGAGATCCTCCGTGTTTTTTCTTTATATTCTTCTTCTTTTGCCCCTCAGTTTTCCTCACAAAGGCGAGCACAGTGCTACTTTTCGCTCTTCTTTTGGTATATCTGATGTGTTAACTGCGATCCTTGACTTCGAATCTGCAAATTTCGTGAGAGATATCAGGGATCCGGAACACCCCTATTCCTTAGAACAGCTCAGCGTCCTCTCTGAGGAATCAATCACAGTTGATGACAAATTGGGCCGGATTCTGATAACTTTTACACCGACTATCCAGCACTGCAGCATGGCAACAGTGGACATCAAAGTATCTCCAGGATCTCATGCAGATGAAGAATCAGGTGCAGCTGAACTTTTCTTTGAACAACAACATTTACCTTAA 405 0.4346 MLPLTPSKFMRSSVFFLYILLLLPLSFPHKGEHSATFRSSFGISDVLTAILDFESANFVRDIRDPEHPYSLEQLSVLSEESITVDDKLGRILITFTPTIQHCSMATVDIKVSPGSHADEESGAAELFFEQQHLP 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0183 134 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 58 107 IPR034904 -
Lele50g0183 134 Pfam Iron-sulfur cluster assembly protein 60 106 IPR002744 -
Lele50g0183 134 Gene3D - 47 112 IPR034904 -
Lele50g0183 134 PANTHER UNCHARACTERIZED 54 107 IPR039796 GO:0106035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0183 Lele-ChrLele50 1072314 1073870 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0183 50 1072314 1073870 Lele51g0178 51 1020744 1022635 hybridization
Lele50g0183 50 1072314 1073870 Lele52g0182 52 1082104 1084110 hybridization