Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0157 ATGGTGGTTACCACCCCTGTTTGTTACAATCCCTCTTCCAGATGTCTGGTTCCCAATTTGCCTCGACAAAGATTCTCTCATCGTTCTTCTTTTGCTGATTCCTTTTCTTCCTCGAGATCAAACTTTTTCTCCTGCTTTATTCCAAGGAGGCCCCTTTCTGGGGGAAATTGGCTCCGGCTTCAAAATAACATGGACGATTTGATTAAAAATTATGCTATCCGAGATAAAAGTAGTGATGAAGGCGTTCAAGTGCTTGAGCAAGAAACTTTAATTGATGGATCCTCCCAGCTCCGCAAGTTTACACTTCGTGAGCTGGAACCAATCCTCAATCGACTGAGCAAGTGGATGGTATCTGCCTTCTTTGGTGCTCTCATTCTTTGGAGGCATGATGCAGAATCCTTATGGTTTGCTGCAGGATCCGTCTTAAATGCTATGTTTTCTGTCGTACTCAAAAGAATACTGAACCAGGAACGGCCTTCTACCCTAAAATCCGACCCTGGAATGCCATCTACACATGGACAATCCATCTTCTTTTTTGTCGCTTTTGCTATTTTGTCAAGTATAGAATGGCTAGGGTTAAGTGGATCCAGCATTACCATCAGTGGACTGGTCTTGGCACTTGGTTCTTACTTTTCATACCTACGGGTGTCTCAACAACTTCATACAGCGAGCCAAGTGGTTGTTGGCGCCATCATAGGATCCATCGACTCTATCTTGTGGTATTGGTTATGGAATGCTTTTGTGCTGGATGCATTTGAATCTTCCCTATGGGTTAGAGTCGCTGTTCTTTTGGGGTCTGCTGGAATTTGCTTTGGTTTTGTAATCTATGTAATTCGCCATTGGCTGAAAGACGACTAG 858 0.4371 MVVTTPVCYNPSSRCLVPNLPRQRFSHRSSFADSFSSSRSNFFSCFIPRRPLSGGNWLRLQNNMDDLIKNYAIRDKSSDEGVQVLEQETLIDGSSQLRKFTLRELEPILNRLSKWMVSAFFGALILWRHDAESLWFAAGSVLNAMFSVVLKRILNQERPSTLKSDPGMPSTHGQSIFFFVAFAILSSIEWLGLSGSSITISGLVLALGSYFSYLRVSQQLHTASQVVVGAIIGSIDSILWYWLWNAFVLDAFESSLWVRVAVLLGSAGICFGFVIYVIRHWLKDD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0157 285 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 162 255 - -
Lele50g0157 285 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 115 247 IPR036938 -
Lele50g0157 285 SMART acid_phosph_2 133 241 IPR000326 -
Lele50g0157 285 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 106 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0157 Lele-ChrLele50 934975 937685 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0157 50 934975 937685 Lele53g0037 53 311241 311972 CCT
Lele50g0157 50 934975 937685 Lele54g0034 54 339928 340683 CCT
Lele50g0157 50 934975 937685 Lele55g1459 55 20755362 20756081 CCT
Lele50g0157 50 934975 937685 Lele56g1394 56 17011916 17012671 CCT
Lele50g0157 50 934975 937685 Lele51g0149 51 873901 876760 hybridization
Lele50g0157 50 934975 937685 Lele52g0156 52 928250 931017 hybridization