Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1295 ATGATGATTATGGAGTTTTGCAGAATCCACTTAGTGGCCGTTCTCTCACTGCTACTTCTTTTTCCAAGCACCACCATAGCCTGGGGAGAAGATGGCCACGCCATTATCTGCAAGATCGCTCAGCCTCGGCTGAACGAGGCGGCCGCGGAAGCCGTGAAGAATCTGCTGCCAAAATATGCAGGAAATGATTTGGGGAGTGTGTGTTCATGGGCAGATCATGTTAAGTTCATATTTCCCTGGTCATCTGTCTTGCATTACATTGATACTCCTGACAACCTTTGCAATTACCAGTACAACAGGGATTGCAAGGATGAGAATGGAGTGAAGGGAAGATGTGTTGCAGGAGCCATCAACAATTACACCAACCAGCTCCTCAGCTATGGCAGCCATTCTGATTCACAATATAACCTCACCCAGGCACTTCTATTCCTGTCTCATTTTATGGGAGATATACATCAGCCTCTCCATGTGGGCTTTACTTCGGACAGGGGTGGCAATACAATTGATGTTCACTGGTTCACTAGAAAGACTAATCTCCATCATGTTTGGGATGATAACATCATTGAGACAGCAGAACAAAGATTCTACGACTCTAACATGGATGGCTTCATTGATGCACTTCAACAGAATATTACGAAAGAATGGTCTGATCAAGTAGGAGACTGGGAAACCTGTGATAATAGCAAGACCACATGCCCAAATATATATGCATCTGAAAGCATCAAAGCAGCATGCGAATGGGCATACAAAGATGTCTCTGAAAATTCAGTACTTGGAGATGATTACTTCTCATCTCGTTTGCCAATAGTAAATCAGAGGTTAGCTCAAGGAGGAGTTCGTTTGGCAGCCACACTAAATCGCATTTTCAGCTGA 873 0.4422 MMIMEFCRIHLVAVLSLLLLFPSTTIAWGEDGHAIICKIAQPRLNEAAAEAVKNLLPKYAGNDLGSVCSWADHVKFIFPWSSVLHYIDTPDNLCNYQYNRDCKDENGVKGRCVAGAINNYTNQLLSYGSHSDSQYNLTQALLFLSHFMGDIHQPLHVGFTSDRGGNTIDVHWFTRKTNLHHVWDDNIIETAEQRFYDSNMDGFIDALQQNITKEWSDQVGDWETCDNSKTTCPNIYASESIKAACEWAYKDVSENSVLGDDYFSSRLPIVNQRLAQGGVRLAATLNRIFS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1295 290 Gene3D P1 Nuclease 28 290 IPR008947 GO:0016788
Lele49g1295 290 SUPERFAMILY Phospholipase C/P1 nuclease 28 288 IPR008947 GO:0016788
Lele49g1295 290 Pfam S1/P1 Nuclease 28 290 IPR003154 GO:0003676|GO:0004519|GO:0006308
Lele49g1295 290 CDD S1-P1_nuclease 28 289 IPR003154 GO:0003676|GO:0004519|GO:0006308
Lele49g1295 290 PANTHER ENDONUCLEASE 4 11 289 IPR003154 GO:0003676|GO:0004519|GO:0006308
Lele49g1295 290 FunFam Endonuclease 2 28 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1295 Lele-ChrLele49 8758880 8761482 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1295 49 8758880 8761482 Lele49g1295 49 8758880 8761482 ECH
Lele49g1295 49 8758880 8761482 Lele51g1303 51 8732279 8734688 hybridization
Lele49g1295 49 8758880 8761482 Lele52g1491 52 18926261 18930197 hybridization