Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1207 ATGAACCTTTATCTTGGGAAAGAAGATCATCTTTCTCTCACAATAGGTTTTAATATACCTGAGAGTTATGATGGATCTGATCAAACAACAACCAGTGAAAATGATGGTTCAGAGAGAATTAGCAACCAAGAGGATTTTGAATCAAGTGAAAATGTTCACGGTGTTCAATTTGATCGAAGATCCCAAGAGGATTTTGAACCAATTGAAGATGGCCAGTATGTTCAATTTGATCGAAGATCATTGGAAGATTTTGTGCCAATTGTAGATAGTCATTATGGTCAATATGAACAAAGATCTTTTGAGGACTTTGGACCAGATGAAGATGGCAATCATGGTCTATTTGATGAAGTACCAGCTGATTCAGATTATAAGGGAGAGTATGGAGTGAATGGATATGAAAGGGAAGATTTGGTCACAGAAGGGCCAAGAGTTTCATCTTCCAACCAGCATATGGAAGTTACTGTAAACAACTGTAACGTTTTGGAGGATGCTATTGATAATAACAGAATTTGGGATGAAGCTCCGAAACCTGAAAATGAGACAAGCAGCACAATCTCGGTTGATGACACAATGGTTGTAGAAATGCAGGAAACAAAGCCTGAGCACGGGTTGAGCTCTGTAGTCAACAGGGTTCAAGTCTGGAAAAACAGTTCGGCTAGATCACCTGAGGGCTTGGTTTCCAAAAGTGAGAGAAAAGTAACTTGTGAGCGGAAGAGAACAAAGGCTGCAGAATCCCAACCTTCTGTTTTAAAAGCTAATTCTAGAGGAGTACAAGAAGCCAGGGTGAACCCGACTGTCAATTCAAGTTCAACAAACTCTCAGGCTAGGCTGAGGGCTGCTGCTTTCAACTTTAAAAGTGGTGAACGAGCAGAAAGGAGGAAAGAGGAAAAGACAGAAGCTGAGATTAGAAAACTCAAGAAGAGTCTTAACTTTAAAACGTCACCTATGACTTCCTTTTATCGTTCAGCTTCCGCTACAGCTTCAGCTTCAACTTCATATGGGAATAAGGCTGTATCAGATAACAACAAAAGTAAGAAAGTACAGAATAAACCCAAATTTGCAGGGAGCATATCTGGTGCAGCAGTTTCCTCAAATTTGAAGACAAGAAGTAGAAATGATCAAGCTGCTGATGAATTTGTAACATCAGCCAAGCCACATAGTACGCCATCCTCTGAGGTTAGTGTGACTTCTCCAAGTCCTATGGCCAACCAAAGCCGCGAGGTTGATTCAAAACAAACGGCCAGATTCCCAGAAGGAAGGAACGAGCAAAGGCCGCGTAGCAAAACCAGAGTTTCAGAGAGCAGCTTTAAGGAGGCAAGAAGGCCAAACAGTAGAGAAAAGAGAACTGAGCAAACTCCGAAACATAGCACTGAAACAACAGCAAGGAAGAATGACAGTGTGAGGAGTATTGATGTCAGAAGCAGTTCTAGAACTGGTAGTCTCACGGTACGTGTGGCTTCCTGA 1464 0.4167 MNLYLGKEDHLSLTIGFNIPESYDGSDQTTTSENDGSERISNQEDFESSENVHGVQFDRRSQEDFEPIEDGQYVQFDRRSLEDFVPIVDSHYGQYEQRSFEDFGPDEDGNHGLFDEVPADSDYKGEYGVNGYEREDLVTEGPRVSSSNQHMEVTVNNCNVLEDAIDNNRIWDEAPKPENETSSTISVDDTMVVEMQETKPEHGLSSVVNRVQVWKNSSARSPEGLVSKSERKVTCERKRTKAAESQPSVLKANSRGVQEARVNPTVNSSSTNSQARLRAAAFNFKSGERAERRKEEKTEAEIRKLKKSLNFKTSPMTSFYRSASATASASTSYGNKAVSDNNKSKKVQNKPKFAGSISGAAVSSNLKTRSRNDQAADEFVTSAKPHSTPSSEVSVTSPSPMANQSREVDSKQTARFPEGRNEQRPRSKTRVSESSFKEARRPNSREKRTEQTPKHSTETTARKNDSVRSIDVRSSSRTGSLTVRVAS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1207 487 MobiDBLite consensus disorder prediction 321 487 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 19 37 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 225 244 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 411 470 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 38 68 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 321 351 - -
Lele49g1207 487 Pfam Targeting protein for Xklp2 (TPX2) domain 288 325 IPR027329 -
Lele49g1207 487 MobiDBLite consensus disorder prediction 246 274 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 217 274 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 19 68 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 358 410 - -
Lele49g1207 487 MobiDBLite consensus disorder prediction 471 487 - -
Lele49g1207 487 Coils Coil 288 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1207 Lele-ChrLele49 8039194 8042474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1207 49 8039194 8042474 Lele49g1207 49 8039194 8042474 ECH
Lele49g1207 49 8039194 8042474 Lele51g1227 51 8092232 8096623 hybridization
Lele49g1207 49 8039194 8042474 Lele52g1589 52 19794948 19799315 hybridization