Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1194 ATGCACCCCATCAATCGGCTACCCAGTAGTGGCCACTCCTCGCCTTCGTCGCCTCAGTCGCCGCACCGGTCTCCCAGGCTACGTCGTGGTTGGTCCAAGACTGGCCGGTTCTCTCCCGTTCAGCCGGCTGGTAGGACCCCTGCCCAGCGACTCTCTTGGATCTTTCTTTCCTTCCTACTACGCCGCCAGGGCGTCTTCCTTTTCGCTCCTCTTATTTACATCCCTGGCGTGCTCCTCTACATGGGCACTGCCTCGTTTGACGTCGTTCCGGTCATCAAACACCGCTATGCTCCTGGGTCTGTGTACCGGAGCCCGGAGCTGTATGTGAAGCTACGCCTTGAGATGGATGCCGATAATTCCTCTGTTGATGCGATATCAACAATATGGAAGCATTCCTACAAAGGTGGGGAGTGGAAACCATGTGTCAACAAATCTTCAGAAGGCCTACCAGAATCAAATGGTTACATTTACATAGAGGCCAATGGTGGCTTGAATCAACAAAGGACATCGATATGCAATGCTGTTGCAGTGGCTGGGTATCTGAATGCTACACTCTTGGTCCCAAACTTCCACTATCACAGCATATGGAAAGATCCTAGCAAATTTAGGGACATTTATGATGAAGAATATTTTGTCAATACCTTGAAAAATGACGTTCGGGTGGTCAATAAGATTCCTGAGTACCTGATGGAAAGATTTGGCAGCAACCTCTCAAACATTTATAATTTCAGGATAAAGGCATGGTCTTCTATAGGGTACTACAGAGACACAGTACTCCCAAAGTTACTTGAAGAAAAGGTTATAAGGATTTCTCCTTTTGCAAATAGATTGTCATTTGATGCTCCTCCAGCTGTCCAGCGACTTAGATGCTTAGCAAATTATGAGGCTTTACGGTTTTCTAGTCCTATATTAACTTTAGGTGAATCTTTGATCGCAAGGATGAGAGAACGTAGTGGCAAATATGTCTCCATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCATGTTGTGTTTTTGATGGTGGAAAGCAAGAAAAAAGTGATATGGATGCAGCAAGAGAAAGAGGTTGGAAAGGGAAATTTACAAAACCTGGACGAGTTATACGGCCTGGAGTTAACAGGATTAATGGGAAGTGTCCCCTAACTCCTTTAGAGGTTGGATTGATGCTTAGGGGCATGGGTTTCTCTAAGAACACGTCTATCTTTTTGGCATCTGGAAAGATATATAATGCGGAGAAAAATATGGCTCCACTACTGGAAATGTTTCCCAATTTGCAGACAAAGGAAACCTTGGCATCTGAAGAGGAGCTTGCTCCATTTAAGAATTATTCTTCCAGGATGGCTGCTATAGACTACACTGTTTGTCTTCATAGTGAGGTGTTTGTCACAACTCAAGGTGGTAACTTTCCTCATTTCCTGGTGGGCCACAGAAGATACTTATATGGTGGACACGCTAAGACAATTAAGCCTGATAAGCGGAAGTTAGCATTATATTTTGATAATCCCAATATTGGATGGAAGACTCTCAAACGTCAACTGCTGAGCATGAGGGCGCATAGTAATTCCAAGGGGTTTGAGCTAAAACGACCTAATGATTCAATATATAGCTTTCCATGCCCACACTGCATGTGCCGTGCAAACAGAACTGATCATTCTAGATCTTCAACAGCAAATTGA 1680 0.4446 MHPINRLPSSGHSSPSSPQSPHRSPRLRRGWSKTGRFSPVQPAGRTPAQRLSWIFLSFLLRRQGVFLFAPLIYIPGVLLYMGTASFDVVPVIKHRYAPGSVYRSPELYVKLRLEMDADNSSVDAISTIWKHSYKGGEWKPCVNKSSEGLPESNGYIYIEANGGLNQQRTSICNAVAVAGYLNATLLVPNFHYHSIWKDPSKFRDIYDEEYFVNTLKNDVRVVNKIPEYLMERFGSNLSNIYNFRIKAWSSIGYYRDTVLPKLLEEKVIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTLGESLIARMRERSGKYVSIHLRFEEDMVAFSCCVFDGGKQEKSDMDAARERGWKGKFTKPGRVIRPGVNRINGKCPLTPLEVGLMLRGMGFSKNTSIFLASGKIYNAEKNMAPLLEMFPNLQTKETLASEEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLVGHRRYLYGGHAKTIKPDKRKLALYFDNPNIGWKTLKRQLLSMRAHSNSKGFELKRPNDSIYSFPCPHCMCRANRTDHSRSSTAN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1194 559 PIRSF UCP009360 28 549 IPR024709 -
Lele49g1194 559 Pfam GDP-fucose protein O-fucosyltransferase 155 481 IPR019378 -
Lele49g1194 559 MobiDBLite consensus disorder prediction 7 23 - -
Lele49g1194 559 CDD O-FucT_plant 155 485 IPR024709 -
Lele49g1194 559 MobiDBLite consensus disorder prediction 1 44 - -
Lele49g1194 559 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 56 556 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1194 Lele-ChrLele49 7926368 7931432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1194 120 548 Miscellaneous Gene Families AT1G22460 38.222 1.10e-95 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1194 49 7926368 7931432 Lele49g1194 49 7926368 7931432 ECH
Lele49g1194 49 7926368 7931432 Lele51g1214 51 7982872 7988262 hybridization