Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0879 ATGGACGATAGTGAGGACGTATTCGAAGATTGGGAGGACGCGTTCTTGGACCAATTAATCCAGGTGGAAGAACTTGCTCTCTCTGCTATTAAACCAAGTTCCAATCCTTCTCATTCCCAAAATCCTCCTCCTCCGACCGCTTTATCCACTTCACACGCCCCTCCACAACCTCCTCAATCTCGACACCACCACCTCCAACAACCGCCGCATTCTGTCGTGCTTTCTTCCTCCTATAATGCTGTCAGTTACTCGCCCCCACGAGAGCTGTCTCAGAGGAGCACGGATTTTGATTCTTTTCAACACTCTCCTAGTGGCCCTGCAAAATGCCCTTCTCTTGCGGATGCTCCGATTTTACGACGACCCGATAAAGACAAAGATTATGACATCGAGCGATTAAAGGTGAGGTTTGCTTTGTCGTTGGGTAATAATCAAACTGATGTATTGGCTTTGAATGAAGTGTTGTATCGCGTGGATGCTAATGGGTTATGGATTGTATGTGTTGTTGAATTTTACTTCTTGGAGGGTCTCATGGGGTCGAGGGAGCTTGGACAAGCATCGAAGCAGCTTGCTCTCCTGGAAAAGGAGTGTCTTGAATTAAAGAAAGAAAGGGACATGAAAGATGAGCAACTCAAATTTGTAGCTTTAAAGAATGAAGAAGAAAATGGACGTGCTAACCGTTCAAAGAGTATAAACATCATTTGTACAAATTCTAATGAGCATGATGGCAGGGAACGGGGAAATATTGCTCCAGACCATCGTGGCATCTCTCAAAAAATTCAAAGTAGAGAATATTCAAAAGTGCAGGCTGCTGAGTCAAGTTATAAAGCTACAGGAGTTCAAACAGACATAGACCCTCAGAAAGAAGCTCAAAACATTCTGAATGATGTGCCTGCTTGTCTTGAACTTTCTGAGAAGTTGCGGGCAATTTGGGGCTCATTGGGTGAACAAAAGCTAGGAAGCAATGTGATATCCAAATTACTTGTGGGCTGTCAAAGAGATTTTCATATTCTTCTTGGGTTGATGCCCATAAATCTACCCTCTAAGATCACAACCAAATTTCTTACAGAAAGAAGTTCTTCTGGAGTAGCGTTGCAATATATCAAGGACTGTTTTCATACTCCAGAAGCAACCAAAGTGTCACAACTCTACCATATGTTGACAAAGATAACTGAAGGGACAGCTGTGTTGGAAACTCTGTTTGAACCATTACTTGATCTTTGTAGTGTTAAAAATGTTGTTGTAGTCCATAGCACTCTATGCATCCTGCATACTTATCTGAAACTACTCTTGGAATTGGAAAAGGATTCTGGAAGATGGGACAATGTGCTCGTTGAGGGGGTTTGCTTGGAGAACAATATTGTTGATTCTTGTGGACTTGAAGGTGTGAAAGTTGGAGAACTCTCTTGTATGCACACCAATGAGACATCTCATGCAGGTTGCGATCAGGTCCAGCTAGAATTGTTTGATGTAGAAATGCTAAGCAAAATAAGGTGTTGGAACCATCGGAATTCCTTGCAGCCTCAAGTAAATTGGGTTTATCTTTTTGAAGCAATGCATCATGTTGCTATGAAGATGACAGAGGAAAGTGTGAGAGTGGAAGCTACATCCATCATGAATGTGATTCTTCTAAGAAGTAATGCTTACATTGATAGGGAGCGGTTTGAACAGAAAATGGCATTTGATACTATTTCACAGTTGCTTAAAAGGGATATTGGGTTACGTGTGAAACAACATGCTCTGAGATTCTTGTACCTACTTCTGAATTGTCCAAAACTATTGGTTACTTTCTGTTGTGGTTGCAAAGAGGGAGAGCGTGCTAGTGCTACGGATGACAATACATCTACCTCAGGTTCCCCGAAATTCAATATCATTCTTCAAGGTTTGGCAGATTGTGTTGCATCCCATGGAAGTGGATTACAGGAGTTGAAACTACGCCGAAATGCTATTCTTGTGCTGGCATTTCTTGCATCGTCTGGAAAAGCAGGCTTTGACATTCTTATCAGTTATAGGTTCTCCAGAGGAACAAACTATCTTTTGCTTATTTTGCAAGTACTGGTATCACAGGTCGACCAAGAAGCTAAAGCCGGTGAGGAGCTGCCAGAGATTTTCAGGGAGAGGACATTTCTGATGCGGGAGATCCTAATATTGCTCAACAGACTAGTGTCCAGCCCTTCATACTCTGCTACCGTCTTACAAGTTTTAACAAGCACCAGAGATATGGCCAGTTTGACAATTGATGTTGCAAACAGATTGTCCCGGAAATGTAAGACAGTGAATGGACATGACAGCATGGTAAATCATACAAGAGAAACCGAAATCGTTGATCTAGGCCGTATCTTTAAGAAAAGGGTATTCACATATTTAGGAGATGATTTCTAA 2379 0.4203 MDDSEDVFEDWEDAFLDQLIQVEELALSAIKPSSNPSHSQNPPPPTALSTSHAPPQPPQSRHHHLQQPPHSVVLSSSYNAVSYSPPRELSQRSTDFDSFQHSPSGPAKCPSLADAPILRRPDKDKDYDIERLKVRFALSLGNNQTDVLALNEVLYRVDANGLWIVCVVEFYFLEGLMGSRELGQASKQLALLEKECLELKKERDMKDEQLKFVALKNEEENGRANRSKSINIICTNSNEHDGRERGNIAPDHRGISQKIQSREYSKVQAAESSYKATGVQTDIDPQKEAQNILNDVPACLELSEKLRAIWGSLGEQKLGSNVISKLLVGCQRDFHILLGLMPINLPSKITTKFLTERSSSGVALQYIKDCFHTPEATKVSQLYHMLTKITEGTAVLETLFEPLLDLCSVKNVVVVHSTLCILHTYLKLLLELEKDSGRWDNVLVEGVCLENNIVDSCGLEGVKVGELSCMHTNETSHAGCDQVQLELFDVEMLSKIRCWNHRNSLQPQVNWVYLFEAMHHVAMKMTEESVRVEATSIMNVILLRSNAYIDRERFEQKMAFDTISQLLKRDIGLRVKQHALRFLYLLLNCPKLLVTFCCGCKEGERASATDDNTSTSGSPKFNIILQGLADCVASHGSGLQELKLRRNAILVLAFLASSGKAGFDILISYRFSRGTNYLLLILQVLVSQVDQEAKAGEELPEIFRERTFLMREILILLNRLVSSPSYSATVLQVLTSTRDMASLTIDVANRLSRKCKTVNGHDSMVNHTRETEIVDLGRIFKKRVFTYLGDDF 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0879 792 MobiDBLite consensus disorder prediction 27 71 - -
Lele49g0879 792 MobiDBLite consensus disorder prediction 83 117 - -
Lele49g0879 792 Coils Coil 182 209 - -
Lele49g0879 792 SUPERFAMILY ARM repeat 364 734 IPR016024 -
Lele49g0879 792 MobiDBLite consensus disorder prediction 83 105 - -
Lele49g0879 792 MobiDBLite consensus disorder prediction 37 52 - -
Lele49g0879 792 PANTHER ATR INTERACTING PROTEIN 3 790 IPR044952 GO:0006974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0879 Lele-ChrLele49 5433840 5439871 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0879 49 5433840 5439871 Lele49g0879 49 5433840 5439871 ECH
Lele49g0879 49 5433840 5439871 Lele51g0896 51 5505409 5513612 hybridization
Lele49g0879 49 5433840 5439871 Lele52g0901 52 5837380 5843670 hybridization