Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0722 ATGGTGAAACATCGCTTTAGAGAATCTATAAAATCATTGTTTGGAAGTCACATTGACCCTGACAAAGAACAGCAGCTGGAAGGAGCTAAAACAGAAATTGAAGACAAAGTAAAAAGAATATTGAAGCTTATTGGAGATGAGAATCATGAAGAGGATGGTAGCCCAGTACAATTTTCCAATAAGGAACCACTTGTAGAACTAATTGAAGATTTCCATAATCAATACAGATCCCTCTATGCTCGATATGACCATCTAACAGGAGAGTTGAGGAAAAAGATTAATGGAAAGCAAGGAAAGGAGAGTTCTTCATCTAGCTCAGAGTCAGATTCAGATTACTCTTCAAAGGACAAAGACAGCAAAAATGGACAGCTGGAAAATGAATTCCAAAAGATAATTGATGGCCTAAAACAAGAACTTGAAATGAAATGTACAGAAGTTGCGGAATTAAGTCAAAAAGTGACAGTTACACGTGAAGAAAAGGAGGATCTAAATTCAAAATATCTTGCAGCCTTGAGCAAGATAGAAGAAGCAGAGAAAATCAACGCAGATTTGAAAACTGATGCTGAAACATTAGATATTCAGAGATCAAAACTTTTGGAAGAGAATGGTGAACTAAAGAAGCAACTGGATAATGCTGGAGAGATTGAAGCTGAACTGAATCATAGATTGGAAGACTTGAAGAGAGAGAAAGATAATTTGACCCTGGAGAAAGAGACAGCTATCAAGCAGATTGATGAGGGACAGAATATTACAGACAGCCTGAAAGCCACAGTGAGTCAACTAAATGATGAGAAATTATCCCTTGGAAAAGAACTAGAAGCTGTGACAGGTGAATTCTCCATTCTGAAGCAGCAATTGAAACAAGCACAGCAGCAAGAGACAAATTTAAGCCATAATCTGAAAGTTGCTGAGGAAGAGAAGGAATCATTGAAGTTCAAACTTTCACAGGTTTCAAATGAAGTTCAGCTTGCTCATGATAGAATACAAGAACTTGTAGCTGAATCAAATCAGTTAAAGGAGAGACTGAATGAGAGGGAAAAGGAAGTTTCAGACCTCACTCAAATGCATGAAGGGTATGAGAATGAATCCTTGAATAAAATCAGGGCATTAGAGGCACAAGTCACAAACCTCAAGCTGGAATTGGAATCACTGCAAACACAGAAACAAGACCTGGAAGTGCAAATGACTAGTAGCACAACTGAAGTTAGAGAGCTGGTAGAGCAAAATTCAGGACTACTAAACCAAATTTCAGAACTAGAAATAAAGTTCAAAGAAAGAGAAAATGAACTGTCTTCTGTCGTGAAGAATCTTGAAGATAATGAGAATAGCTTGTCATCCAAAATAGCCGATTTGACATCTCAGATCAATAATCTGCTAACTGATGTAGATCAGCTACGTGCTCAGAAGTATAAACTGGAAGAGCGGGTATTATCTGAAAGTAATGAAGCATCAGCTCAAGTCAAAAGCATCACAGACCAGGTAAACGTATTACAGCAGGGGGTAGAGTCCCTACAACACCAGAAATCTGACTTGGAAGTGCAACTTGCCAAAATGGTCCAAGAAAATTCAGATCATGTGATTCATATACAAACTCTAAAAGAGGAGGTGGCCAGTAAGACTCTAGATCAAGAGAGGTTTGTGGAAGAAACAGAAAAATTAACCACGCAGATAAGGAAGCTGGAATATGAGTTAGACATGGTAAAGGGCCAGAAGGGTGAAGTTGAAGAGCAAATGAGGGTTAACAACTATGAGACCATACAATTGAGAGAGGGGAACTCAGGGCTACAAGACAAAATATCTGAAGTGGAGAAAAGATTGGCAGAGAGGGAGACCGAGATCTCTGCTCTTCAGGATAAAATTAAAAAAGCAGAGGATGAAGGTTCAACTCAAATAATGGCCTTAACATCACATATTGACAATCTTCAACAAGATTTGGTTTCCCTGAATAATGAGAAGCAAGAATTGGCACAACAGTGTGAAAATCTGCAGTTGGAGTTGGACTCCATAAATAACAGCAAGAATGAATCTGAAGAGCAAGTAAGAGCTAATGTCCACGAGAACAGTCAGCTGAAAGAGGAAATGTCCGGGCTACAAGAGAAAATTGCTGCCCTGGAGAAAACTTTAGCAGAGAGGGAGACCGAGATCTCTGCTCTTCAGGATAAAATTAAAAAAGCAGAGGATGAAGGTTCAACTCAAATAATGGCCTTAACATCACAGATTGACAACCTTCAACAAGATTTGGTTTTCCTGCATAATGAGAAGCAAGGATTGGCACAGCGGTGTGAAAAACTGAAGTTGGAGTTGGGTTCCTTAAATAACAGCAAGAATGAATCTGAAGAGCAAGTAAGAGCTAAAGTCCACGAGAACAGTCAGCTGAAAGAGGAAATGTCCGGGCTACAAGAGAAAATTGCTGCCCTGGAGAAAACTTTAGCAGAGAGGGAGACCGAGATCTCTGCTCTTCAGGATAAAATTAAAAAAGCAGAGGATGAAGGTTCGACTCAAATAATGGCCTTAACATCACAGATTGACAACCTTCAACAAGATTTGGTTTTCCTGCATAATGAGAAGCAAGAATTGGCACAGCGGTGTGAAAAACTGAAGTTGGAGTTGGGTTCCTTAAATAACAGCAAGAATGAATCTGAAGAGCAAGTAAGAGCTAAAGTCCACGAGAACAGTCAGCTGAAAGAGGAAATGTCCGGGCTACAAGAGAAAATTGCTGCCCTGGAGAAAACTTTAGCAGAGAGGGAGACCGAGATCTCTGCTCTTCAGGATAAAATTAAAAAAGCAGAGGATGAAGGTTCGACTCAAATAATGGCCTTAACATCACAGATTGACAACCTTCAACAAGATTTGGTTTTCCTGCATAATGAGAAGCAAGAATTGGCACAGCGGTGTGAAAAACTGAAGTTGGAGTTGGATTCCTTAAATAACAGCAAGAATGAATCTGAAGAGCAAGTAAGAGCTAAAGTCCACGAGAACAGTCAGCTGAAAGAGGAAATGTCCGGGCTACAAGAGAAAATTGCTGCCCTGGAGAAAACTTTAGCAGAGAGGGAGACCGAGGTCTCTACTCTTCAGGATAAACTTCAAAAAGCAGAGGATGAAGGTTCGACTCAAATAATGGCCTTAACATCACAGATTGACAACCTTCAACAAGATTTGGTTTTCCTGCATAATGAGAAGCAAGAATTGGCACAGCAGTGTGAAAAACTGAAGTTGGAGTTGGATTCCTTAAATAACAGAAAGAATGAATCTGAAGAGCAAGTAAGAGCTCTGAAAGAGGAAATGTCCGGGCTACAAGAGAAAATTGCTGCCCTGGAGAAAAGTTTAGCAGAGAAAGAGCATGAGTTCTCTGCTTTACAGGACAAACTCCACAGGGAAAAGAATGAGGCTTCATCTCAAATAATTGCCTTCACATCCCAGACCAAGAATCTGCAAGAAGAATTGCTTTCCTTGCAGAAAGAGAAAGAAGAATCGATGCTTCAGTATGATAGAGTTAGAGAAGAACATGCAGAAAACTCGACCTTGCTAGAGAATGAAAAGAAAGAGCTAGCAAGCAAAATTTCGGATCATCAGAGAATGCTGGAAGACCGAGAAGATGCATACCAGAACTTAAATGAAGAATATAAACAAGTTGAGAGTTGGCTTCAGGAATGTAAGGTGAAACTTGAAGTTGCAGAAAAGAAGGTTGAAGAAATGACTGAAGAGCTTCATGATGGCATTGAATCAAAGGATCAGATTTTAAGTGATTTGGAACAAACAGCAGAAGACTTGAGAAGGGATTTGGAAGTGAAGACAGATGAAATCGGTACTTTGCTTGACAACATCCGAAATATCGAGGTCAAACTTCGTCTGTCAAACCAGAAGCTTCGAGTCACAGAACAATTGCTCAGTGAGAAGGAAGAGGACTTTAGAAAGGCAGAAGAGAAGTATCAGGAAGATCAGAGAAAACTTGAAGACAGGATTGCTAAATTGTCAGGAATAATTGCTGCTAACAATGAGGCCTATCAGGAAACAGTCAGCAACATCAAAGAGAGCGTGAGGTGTGTGATGACTGGCATGGATACGGTGATCGGGAAATTTGCTGATGACCATAGAAATTATGAAAGTCGTATTTCACACATTTCAAATGAGCTTCACATAGCAAAGGATTGGATTAGAGAGATGAATGAGGAAAGAGAGAAGTTGAAGAAGGACAGACACCATTTGGGGGAGCAGCTGCAGGAAAGAAATGAAAAAGAATTGGCTTTGAGAGAGAAGGTTCAGAAGCTAGAGTCGAAGGCTAACAAGGAAGAACTGGAGAACAAAAATCTGACGACAAGAGTGGTTCAACTTGAGAAGTCAGTGGCAGGACTAGAGCAGATGGTAAAAGATAAAGACGAAGGGATACTGGGCTTGGCGGAAGAGAAAAGAGAGGCCATCAGGCAGCTCTGTGTGTGGATTGATTACCATCGCAGTCGTTGTGACTATCTCAAGGTCATTATATCCAAGACTCCCAGAGTTCAGAGAGCAAGTATTCGCAATTTGAAAGCAACGAGTGTGAGATCTACGAAAAGAAACAGGAAAACTATATGTACTCAGAGCATTGAAGCTCAACACTCCATTGCAATAATTCCAGAGACGAACGAGTTGCAGATCGATGACCCTGGAGAGCACAGAAACAAAGTGATCATGACATACAAGAGACGAATGTCGAATGGGACGGCAGAGAGGGACCGTGACCGCGCAGGAAAAGGTAGGAACAAGATGAAGATTGATTGTTTCAAACATAAGTTTCTCTCTAAGCACAAAAGTTTGCTCCTCAAGTTCGTGCTCGCCATTTTCTTCTTTGGTCTCGCTTTTCGGCTCCTTTTCTTTCATTCCCCTGAAATTTCTCCCATTTTACAATCCCCTTCCCCTCAGAAAGATACAATTCTTGAAGAGCCTGTTGTATCAGCGCAAGACACTGAGGATGAAGACAATACTGCAGATCAAGAATCTCACACAGAAAATTGCGATCTCTTTACGGGTGATTGGATCCCAAACCCCTCGGGTCCATCTTATACCAACGACACCTGCGAATTCATCGAAGGTCATCAGAATTGCTTAAAAAATGGGCGTCCCGATACAGGATATCTAAACTGGAGATGGCGTCCACGAGACTGTGAGTTACCTCAATTTAGAGCTAAGAAATTTCTGAAACTGATGCGGAATAAACATTGGGCATTAATTGGCGATTCCATATCCCGCAACCATGTGCAGTCGTTGCTGTGCTTGCTTGCAAAGGGAGAGAAACCTGTGATGGTCTACCACGATGAGGAATATAGGTCCAGAAGGTGGCGCTTTCCCTCATATAACTTCACCATGTCAGTTATATGGTCACCATTCCTTGTAGAAGCTGCTATATTTGAGGACATGAATGGTGTTTCAACTTCTGAAGTTGAGCTGCATCTTGACAAACTTCATAGTGAATGGACAGATCAGTACCAGAGCTTCAATTACATGATTATTTCAACTGGTAAATGGTTTCTTAAATCTTCAATATACTATAAGAATGAAACTATACTGGGCTGCCACAACTGTCCTCCTAAGAAGAATCTGACAGAACTGGGGTTTGATTTTGCCTACCGAAAAACCCTCCAACAAGTCCTGAACTTTGTTGCAACTTCCAATCACAAAGGCATGATCTTTTTTAGGACATCCACACCTGATCACTTTGAGAATGGAGAGTGGTTTAGTGGAGGAACTTGCAACAGAACAGCACCAGCTAAGGAAGGTGAGATGGAAATGAAGGATTTGAACCAGATTCTTCGAGACATCGAATTAGAGGAGTTTGCTAAGGCAGCTGAGAATGCTTCAAGAAATGGAGTGAACCTGAAACTGCTTGATCTATCGCCACTCTCGCTAATGAGACCAGATGGTCATCCTGGACCATATAGACAGTTTCATCCATTTGCCAAGGGCCAGAATGCACAAGTTCAGAATGATTGTTTGCATTGGTGCTTACCAGGGCCAATCGACTCTTGGAACGACATAATAATGGAGATGGTCATATATGGCTAA 6039 0.4092 MVKHRFRESIKSLFGSHIDPDKEQQLEGAKTEIEDKVKRILKLIGDENHEEDGSPVQFSNKEPLVELIEDFHNQYRSLYARYDHLTGELRKKINGKQGKESSSSSSESDSDYSSKDKDSKNGQLENEFQKIIDGLKQELEMKCTEVAELSQKVTVTREEKEDLNSKYLAALSKIEEAEKINADLKTDAETLDIQRSKLLEENGELKKQLDNAGEIEAELNHRLEDLKREKDNLTLEKETAIKQIDEGQNITDSLKATVSQLNDEKLSLGKELEAVTGEFSILKQQLKQAQQQETNLSHNLKVAEEEKESLKFKLSQVSNEVQLAHDRIQELVAESNQLKERLNEREKEVSDLTQMHEGYENESLNKIRALEAQVTNLKLELESLQTQKQDLEVQMTSSTTEVRELVEQNSGLLNQISELEIKFKERENELSSVVKNLEDNENSLSSKIADLTSQINNLLTDVDQLRAQKYKLEERVLSESNEASAQVKSITDQVNVLQQGVESLQHQKSDLEVQLAKMVQENSDHVIHIQTLKEEVASKTLDQERFVEETEKLTTQIRKLEYELDMVKGQKGEVEEQMRVNNYETIQLREGNSGLQDKISEVEKRLAERETEISALQDKIKKAEDEGSTQIMALTSHIDNLQQDLVSLNNEKQELAQQCENLQLELDSINNSKNESEEQVRANVHENSQLKEEMSGLQEKIAALEKTLAERETEISALQDKIKKAEDEGSTQIMALTSQIDNLQQDLVFLHNEKQGLAQRCEKLKLELGSLNNSKNESEEQVRAKVHENSQLKEEMSGLQEKIAALEKTLAERETEISALQDKIKKAEDEGSTQIMALTSQIDNLQQDLVFLHNEKQELAQRCEKLKLELGSLNNSKNESEEQVRAKVHENSQLKEEMSGLQEKIAALEKTLAERETEISALQDKIKKAEDEGSTQIMALTSQIDNLQQDLVFLHNEKQELAQRCEKLKLELDSLNNSKNESEEQVRAKVHENSQLKEEMSGLQEKIAALEKTLAERETEVSTLQDKLQKAEDEGSTQIMALTSQIDNLQQDLVFLHNEKQELAQQCEKLKLELDSLNNRKNESEEQVRALKEEMSGLQEKIAALEKSLAEKEHEFSALQDKLHREKNEASSQIIAFTSQTKNLQEELLSLQKEKEESMLQYDRVREEHAENSTLLENEKKELASKISDHQRMLEDREDAYQNLNEEYKQVESWLQECKVKLEVAEKKVEEMTEELHDGIESKDQILSDLEQTAEDLRRDLEVKTDEIGTLLDNIRNIEVKLRLSNQKLRVTEQLLSEKEEDFRKAEEKYQEDQRKLEDRIAKLSGIIAANNEAYQETVSNIKESVRCVMTGMDTVIGKFADDHRNYESRISHISNELHIAKDWIREMNEEREKLKKDRHHLGEQLQERNEKELALREKVQKLESKANKEELENKNLTTRVVQLEKSVAGLEQMVKDKDEGILGLAEEKREAIRQLCVWIDYHRSRCDYLKVIISKTPRVQRASIRNLKATSVRSTKRNRKTICTQSIEAQHSIAIIPETNELQIDDPGEHRNKVIMTYKRRMSNGTAERDRDRAGKGRNKMKIDCFKHKFLSKHKSLLLKFVLAIFFFGLAFRLLFFHSPEISPILQSPSPQKDTILEEPVVSAQDTEDEDNTADQESHTENCDLFTGDWIPNPSGPSYTNDTCEFIEGHQNCLKNGRPDTGYLNWRWRPRDCELPQFRAKKFLKLMRNKHWALIGDSISRNHVQSLLCLLAKGEKPVMVYHDEEYRSRRWRFPSYNFTMSVIWSPFLVEAAIFEDMNGVSTSEVELHLDKLHSEWTDQYQSFNYMIISTGKWFLKSSIYYKNETILGCHNCPPKKNLTELGFDFAYRKTLQQVLNFVATSNHKGMIFFRTSTPDHFENGEWFSGGTCNRTAPAKEGEMEMKDLNQILRDIELEEFAKAAENASRNGVNLKLLDLSPLSLMRPDGHPGPYRQFHPFAKGQNAQVQNDCLHWCLPGPIDSWNDIIMEMVIYG 2012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0722 2012 Coils Coil 272 482 - -
Lele49g0722 2012 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Lele49g0722 2012 Coils Coil 1134 1207 - -
Lele49g0722 2012 SUPERFAMILY Tropomyosin 244 482 - -
Lele49g0722 2012 Coils Coil 1039 1129 - -
Lele49g0722 2012 Gene3D - 909 1010 - -
Lele49g0722 2012 Gene3D - 705 806 - -
Lele49g0722 2012 Gene3D - 1011 1108 - -
Lele49g0722 2012 Gene3D - 807 908 - -
Lele49g0722 2012 Gene3D - 606 704 - -
Lele49g0722 2012 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Lele49g0722 2012 Coils Coil 733 830 - -
Lele49g0722 2012 Pfam PMR5 N terminal Domain 1663 1715 IPR025846 -
Lele49g0722 2012 Coils Coil 1289 1320 - -
Lele49g0722 2012 MobiDBLite consensus disorder prediction 110 124 - -
Lele49g0722 2012 Coils Coil 631 728 - -
Lele49g0722 2012 Coils Coil 1915 1935 - -
Lele49g0722 2012 Coils Coil 132 243 - -
Lele49g0722 2012 MobiDBLite consensus disorder prediction 91 125 - -
Lele49g0722 2012 Coils Coil 592 626 - -
Lele49g0722 2012 Coils Coil 557 577 - -
Lele49g0722 2012 Coils Coil 1385 1454 - -
Lele49g0722 2012 SUPERFAMILY Tropomyosin 657 870 - -
Lele49g0722 2012 Coils Coil 835 932 - -
Lele49g0722 2012 Coils Coil 1215 1274 - -
Lele49g0722 2012 PANTHER COP1-INTERACTIVE PROTEIN 1 956 1069 - -
Lele49g0722 2012 Gene3D - 361 522 - -
Lele49g0722 2012 Gene3D - 1171 1350 - -
Lele49g0722 2012 Coils Coil 494 521 - -
Lele49g0722 2012 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 1716 2008 IPR026057 GO:0016740
Lele49g0722 2012 SUPERFAMILY Tropomyosin 962 1144 - -
Lele49g0722 2012 Coils Coil 937 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0722 Lele-ChrLele49 4394479 4405413 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0722 49 4394479 4405413 Lele49g0722 49 4394479 4405413 ECH
Lele49g0722 49 4394479 4405413 Lele51g0741 51 4491601 4493949 hybridization
Lele49g0722 49 4394479 4405413 Lele52g0747 52 4734196 4735123 hybridization