Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0458 ATGGTTCAATTCCACGAGCATATAATCACAGACATTCTCGACGATTCCAATGGCGGGCTTGTCATACTCTCTTCTGGTCTCTCTCTACCCAAGTTAATTGCCTCCCTTCTCCTTCTACACTCTTCTTCTCAAGGAACCCTCCTTATCCTCTCTCCCACTTCATCTTCTCTCAAATCGAAAATCGTTTTCCACCTCAAAGCTCAGAATCCCCAATTCCAACAAATCCCCTCAGAAATCACCTCCGATCTTCCTGCTCCCCACCGCCATTCTCTTTACTCTTCTGGATTAAGTTTTTTCATCACACCCAGAATTCTAATTGTGGATCTTTTAACGAACAAATTACCCACATCCAATATTGCCGGGCTTATCATACTAAATGCCCATTCACTCTCTGAAACCTCCACTGAAGCATTTATAGTTAGAATTATCCGGTCTCTTAATCGAGATGCATATATTCGGGCTTTCTCTGATAAGCCTCACGCGATGGTCTCTGGGTTTGCTAAGGTGGAGAGAACTATGAAGTGTTTGTACATTCGGAAGTTGCACCTGTGGCCGAGGTTTCAGGTGTATGTTTCACAGGAACTGGAGAAGGCCCCACCGGATGTGGTGGACATAAGGGTGCCGATGACTAAATATATGATGGGGATTCAGAAAGCCATCATCGAGGTTATGGATGCATGTCTAAAGGAGATGAGGAAGACTAATAAAGTTGACGTTGAGGATTTGACGGTGGAAAATGGGCTGTTCAAGTCGTTCGATGAGATTGTGCGCAGGCAGCTGGATCCAATTTGGCATACTTTGGGGAAGAAGACAAAGCAGCTGGTGTCAGACCTCAAGACCTTGAGGAAATTGTTAGATTATCTTGTAAGGTATGATGCAATAACTTTCTTGAGGTATTTAGACACATTGAGAGTGTCAGAAAGTTTTCGATCAGTTTGGATATTTGCAGAGGGGAGCTATAAGATATTTGACTATGCAAAGAAGCGTGTTTATCGCCTGGAGAGGTCAGATGGTGTGAAATTAAATGAGTCAAAGAAGAGTGTGAAAAGCAAAAAGAGAAAATGCAAGGGGGATGGCAATGTCAGTGAAGAAGTTGATGGTAGTTCGTCAAAGAGTTCAAATACTGGATTAGTTTTGGAGGAAGTTTTGGAAGAAGCACCAAAGTGGAAAGTCTTACGTGAGGTTCTTGAGGAGATAGAAGAGGAAAGACAAAAGCAAGGTGTGTCAGGGGAAGAGGTTTTGATTGAAGATGAAGGCACTGATAACGGAATTGTACTAGTGGCATGTAAAGATGAACGTTCGTGCTTGCAGCTTGAAGAATGCATAATCAACAGTCCAAAGAAGGTCATGGCTGAAGAATGGAGGAAGTACTTGCTTAGCAAATTACAGCTGCGGGATGTAGTGCGTCAGAAAAAGAAGCCAAAGGATCCCAAAGGTTTTGGGGTTCTTGATGGAGTTACTCCAATGGCACCTGTACAGAATGCTGAAGCCAGCATTAGCAAGCAGGAGCATGATGCACTCTTGGCAGCAGCATCTGGAATAAGAGATCTAGCTGAAAAGGATCGTACGGTTGAAGATTCTCTGGGACTTGATTCTGGTGGACGGAAACGTGGCAAAGGAAAGGGTAAAGTAGGCAGTAAAAGTGGCCCAGTTACTGCCGATGGCTCTGGAGTTCATAGCAATAAAAAGGCATCAAGAAGTGATCATTTAAGGATTTCTGACTCAAAAAATAATGGCCAAGTGGAGGAAACTAATCCAGTTGGTGCTGGTGGGACAGCTGCAGACAACTTAGTCCTTCGGGGGCATACTAATGCTGCTGCTACGGGATCTGTGAATGCAAAACCATTACCACCTATCCATTTTTATGCCTTAGAAAGTGATCAGCCAATACTTGATGTGTTACAGCCTTCAATAATTATTGTGTATCATCCAGACATGACCTTTGTTAGGGAAATTGAAGTCTACAAATCTGAAAACCCTTCAAAAAGGTTGAAAGTCTATTTTCTTTTCTATGAAGATTCTACTGAGGTGCAGAAGTTTGAGGCAAGTATACGCCGGGAGAATGGTGCATTTGAATCTTTAATCAGGCAGAAATCTATGATGATGATTCCAGTTGATCAGGATGGTCGTTGTTTGGGATTGAATTATACTGTAGAGGGCGACTTAACTACCTCCCAAAACTCAATAACAAGAAAAGCAGGTGGGAGAAAGGAGGCTGATAAAGAAACGAAGGTCATAGTGGACATGAGAGAGTTCATGAGCAGCCTTCCTAATGTTCTTCATCAAAAGGGAATGCGCATTATTCCAGTGACCCTAGAAGTTGGTGACTATATTCTCTCGCCATCCATTTGTGTGGAAAGAAAAAGTATCCAAGATCTCTTTATGAGCTTCACATCAGGACGTCTTTACCACCAGGTGGAGACAATGGTGCGATATTATAGGATACCTGTACTGTTAATTGAGTTCTCACAGGATAAGAGCTTCTCATTCCAGTCTGCAAGTGATATTGGTGATGATGTGACGCCAAATAGTATCATATCAAAGTTGTCATTGCTTGCTTTACACTTTCCCCGGCTACGAATAATCTGGTCTCGGAGTTTGCATGCTACTGCTGAAATATTCGCGTCACTGAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTTCCCTCAGAAGAAGGAATTGTGGAAAATGATGTGAGGGCTGAAAATTACAACACGTCTGCTGTGGAGTTTCTGAGAAGACTTCCAGGTATAACAGATTCAAACTACAGGACCATAATGGAAGGATGTAAGAGCTTGGCTGAGCTTGCTCTTCTTCCTGTGGAGAAGCTGGCCGAACTAATGGGTGGTCAAAAAGCTGCTCGCACTCTTAGAGATTTTGTAGATGCTAAATATCCAACCCTGTTGTGA 2928 0.429 MVQFHEHIITDILDDSNGGLVILSSGLSLPKLIASLLLLHSSSQGTLLILSPTSSSLKSKIVFHLKAQNPQFQQIPSEITSDLPAPHRHSLYSSGLSFFITPRILIVDLLTNKLPTSNIAGLIILNAHSLSETSTEAFIVRIIRSLNRDAYIRAFSDKPHAMVSGFAKVERTMKCLYIRKLHLWPRFQVYVSQELEKAPPDVVDIRVPMTKYMMGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAITFLRYLDTLRVSESFRSVWIFAEGSYKIFDYAKKRVYRLERSDGVKLNESKKSVKSKKRKCKGDGNVSEEVDGSSSKSSNTGLVLEEVLEEAPKWKVLREVLEEIEEERQKQGVSGEEVLIEDEGTDNGIVLVACKDERSCLQLEECIINSPKKVMAEEWRKYLLSKLQLRDVVRQKKKPKDPKGFGVLDGVTPMAPVQNAEASISKQEHDALLAAASGIRDLAEKDRTVEDSLGLDSGGRKRGKGKGKVGSKSGPVTADGSGVHSNKKASRSDHLRISDSKNNGQVEETNPVGAGGTAADNLVLRGHTNAAATGSVNAKPLPPIHFYALESDQPILDVLQPSIIIVYHPDMTFVREIEVYKSENPSKRLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQDGRCLGLNYTVEGDLTTSQNSITRKAGGRKEADKETKVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPSICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGITDSNYRTIMEGCKSLAELALLPVEKLAELMGGQKAARTLRDFVDAKYPTLL 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0458 975 MobiDBLite consensus disorder prediction 561 576 - -
Lele49g0458 975 MobiDBLite consensus disorder prediction 525 594 - -
Lele49g0458 975 SUPERFAMILY Restriction endonuclease-like 742 879 IPR011335 -
Lele49g0458 975 Gene3D - 902 973 - -
Lele49g0458 975 SUPERFAMILY RuvA domain 2-like 906 970 IPR010994 -
Lele49g0458 975 FunFam DNA repair endonuclease UVH1 902 974 - -
Lele49g0458 975 PANTHER DNA REPAIR ENDONUCLEASE XPF 1 974 - -
Lele49g0458 975 Gene3D - 743 890 - -
Lele49g0458 975 MobiDBLite consensus disorder prediction 350 373 - -
Lele49g0458 975 FunFam DNA repair endonuclease XPF 744 888 - -
Lele49g0458 975 Pfam ERCC4 domain 747 876 IPR006166 GO:0003677|GO:0004518
Lele49g0458 975 SMART ERCC4_2 744 824 IPR006166 GO:0003677|GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0458 Lele-ChrLele49 2758181 2763713 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0458 49 2758181 2763713 Lele51g0476 51 2802412 2807944 hybridization
Lele49g0458 49 2758181 2763713 Lele52g0495 52 2997536 2999329 hybridization