Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0441 ATGCCAGATTTGAAGATCACCAACCCTATTTCCTTGATTCTTGTTTTCTCTGCAAGAATCCCCTTGGGGACAATCGAGACATCTTCATGTACAGAGATTTTGCCTGAAGTTGATTGGGAATTAGTCTTTATTCTTTATCTTGACACTCTGGAGTTTGTTGAGTGCAGGCAAGAGCAAATAGAATCGGATGAAGCGAAGGAGAAGAACAGAAACCTTTCTTCATCCATGGAGGCTTTGAGGAAGAAGGATCAAAATAGATCTACCTCCCCAAACAAGGCTCAGGATTACCCTTTTCGTACAGGCACACTTTTCAATATTTTTATGCGTAGCTTGCCCCCTTGGGACTTTGGACTTCGATTTCTTGAGCAAGTGCCCTGCCCGCATGTGAAATTGAGGTGGGGAAGAAACTTTGAGGAAGATGATAATAAATTTTTCCCTTTTTATTTCTTCACTATTGAAAGATTAGGATACTGCAGATCACGATTTGATTTTGCCGAAATCTTGCTGGAGAGAGAACCGGAGGATATTGTAGAACACGGATTGAGAGAGATGACGAACTCTGTAACAAGTGAGATCACGGAGAATCACTGGGGCGGAGGATGGGATCATTCAGGGGACAGAAGCTCTTGCCCAAGGTGTTGCTTTTGGGGTGTCTGGCGTAGTGAGGAAGCCTGTATAGAGTGCTACAGAGAATGGTCTTCTTGGATTCGCTCATGGACTTGGACGTGCCCTTTTAGGGCCAACTTTCAGGGAATCAGAAATCCCCGGGCTATACATGCTGATGGGGTACTTGGAGAATATTGTGAGAGAGAGTCTATTGGACAGTGCCTGGCTCCAGACAAGATGGATAGAAAACCTTGTAAGATAATATGGCATGTCCCTTGGGATGAGCTGATGGCACTGGAGTTGGCAAAAGCGGGCAGCAATGATCCATCTCACTTGATCCTCCATCTGAAAAATTTCCGGAGATCTGAAAGTTTTGTTCGAGTCATCAAGTGTAGTACTGATGTGAAGCAGAATTCTGATGGAGCTCTGGTTTCCAGGTACCTTCAAGTCAGAGACATGTACATTTTGCATGGAGTGAAGCTGACAGGAGAGAACAGCTCATCCCCAACAAGCCCGTTATTAATTCAAGAGAGCTCTTATCTCCTGCCACTGCTCCTGAGGATAGGAGATTCATTAAGCACAGTATCACATTTTCAAAGATCTGGAGCAGTGAACAAGAATACAAAGGTCGATGTTCACTTTGTAGAAAACAGATCTCACAAGACAGTGGAATATGCAGCATCTGGAGACCTATCTGTCCTGATGGGTATATATGCACGTATTGGAGATATTGCTCATGTCGGCATCCATCCTCCCAATGTTGCTGCTGGTTACGACCTGGTGTGGCGAAATTGCATAGATGACTATGTTAATCAAGTATCAATTTGGCACCCGCGCGCTCCTGATGGATTTGTTTCTCCGGGATGTGTTGCTGTTGCTGCTTATATGGAACCAGAGCCTGATCTTGTATACTGTGTTGCTGAGTCACTCGTGGAGCAGGCACAATTTGAAGAGCTAAAGGTCTGGTCTGAGCGAGACTCCTACCCATGGGCCTGTCATATGTATCAAGTCCAGAGCGACGCTTGGCATTTCGTGCTTTCAGACAAAGCAAGGAGGAATCTGAGTGGAAGCCCACAAGGATCCGTGATGACCCCCTTAGTCGCTTGCAAATACAATCCTCATAGTCTAAATCTGGATAGGACTCATGATACAATTTCAATCGTCCCTGAAGAGCCTTCCAAATGA 1791 0.4511 MPDLKITNPISLILVFSARIPLGTIETSSCTEILPEVDWELVFILYLDTLEFVECRQEQIESDEAKEKNRNLSSSMEALRKKDQNRSTSPNKAQDYPFRTGTLFNIFMRSLPPWDFGLRFLEQVPCPHVKLRWGRNFEEDDNKFFPFYFFTIERLGYCRSRFDFAEILLEREPEDIVEHGLREMTNSVTSEITENHWGGGWDHSGDRSSCPRCCFWGVWRSEEACIECYREWSSWIRSWTWTCPFRANFQGIRNPRAIHADGVLGEYCERESIGQCLAPDKMDRKPCKIIWHVPWDELMALELAKAGSNDPSHLILHLKNFRRSESFVRVIKCSTDVKQNSDGALVSRYLQVRDMYILHGVKLTGENSSSPTSPLLIQESSYLLPLLLRIGDSLSTVSHFQRSGAVNKNTKVDVHFVENRSHKTVEYAASGDLSVLMGIYARIGDIAHVGIHPPNVAAGYDLVWRNCIDDYVNQVSIWHPRAPDGFVSPGCVAVAAYMEPEPDLVYCVAESLVEQAQFEELKVWSERDSYPWACHMYQVQSDAWHFVLSDKARRNLSGSPQGSVMTPLVACKYNPHSLNLDRTHDTISIVPEEPSK 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0441 596 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 252 336 IPR026847 -
Lele49g0441 596 MobiDBLite consensus disorder prediction 64 94 - -
Lele49g0441 596 Coils Coil 62 82 - -
Lele49g0441 596 MobiDBLite consensus disorder prediction 64 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0441 Lele-ChrLele49 2613087 2621360 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0441 49 2613087 2621360 Lele51g0456 51 2663356 2665274 hybridization
Lele49g0441 49 2613087 2621360 Lele52g0470 52 2824884 2865092 hybridization