Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0229 ATGGCCGCTTCAGTCAAATCCAGTCCCAACACTCCCCACTTCGGCAACAATGGTCGAACCCCAACGATCGAGGCTCAAAAAATGTCTATCTACGAGCAGTCCAGAGAGCAAAGAATCAGAGAAAACCGAGAGAGATTGGAAAAGCTAGGTATTGCGGATCTCTCCCTCAAGCTTAAGGCCCAGACATCTCAACGGCGCAGCCGATTAGACACATCGCACTCTAAAAGCCCTCAGCGACCATCTGCTCCGAAGTCATCCGGACCCATTCGCCGCTCTTCTAGATTGCAGAATGTGGCACCAGTGAGTTACTCTGAAGTGCCCCAAAAGAAAGATGAATCTCTGGAAAATGGAAAGTTTGTGACAGATCCAGATTCAAAGCCAGAAATTTACACCGAAGAACACGAGAAGCTGCTCGGTAACACGGAGAAGCCCTGGACCTTGTTCGTGGATGGGTATGGGAAGGATGGGAAACGAATATATGATTCCATCAACGGGAAAACTTGCCATCAGTGCAGGCAAAAAACCCTGGGCTATCGTACTCAGTGTAGCCAATGCAACATGGTCCAGGGGCAATTTTGTGGAGATTGCCTGTACACGAGATATGGGGAGCATGTACTTGAAGCCTTGCAGAACCTGAATTGGATATGTCCTGTTTGTCGTGGAATTTGCAACTGCAGTTTATGCCGTCAAGCAAAAGGATGGGCCCCCACTGGCTTTATGTATAGGAAGGTATCATCATTGGGCTACAAATCAGTTGCGCACTATCTCATTCAAACCCGTCGCGCTGGTGCAAATGTGGAGGAAAATGCAGAAGCTTCCGTCCCAGTTTCAGCAGAGAAGTCACTACCCATCTCAGACGTAGAAGGCTTATCTAATGAGTGTCCTGGGGGCGATGAAAATAAATGTGTTGGATCATTGAAGCCTCAACCTGAAGGTGATGGAGGTCAAGTTTCTGCTAAGAGATCATTGCTTTTTTCTGATGTGCAAGATCAGCAAGACAAGGATGAATGTTTGGATGCTATGAAACATCAATCGGGAAGTGATAGGGGACAAGTTTCAGCAAAGAGATCACTACCCTTTTCTGATGTGCAAGTGCAAGATCAGGATGGAAAGGTTGCCTCCTCGGATTCAATGATCACAACTGCGCCTTCTACCGAAGTGAAAGATTGTATTGCTAGAAGACTTAGGCCCAGGGTTCAAAAATCATGA 1209 0.4706 MAASVKSSPNTPHFGNNGRTPTIEAQKMSIYEQSREQRIRENRERLEKLGIADLSLKLKAQTSQRRSRLDTSHSKSPQRPSAPKSSGPIRRSSRLQNVAPVSYSEVPQKKDESLENGKFVTDPDSKPEIYTEEHEKLLGNTEKPWTLFVDGYGKDGKRIYDSINGKTCHQCRQKTLGYRTQCSQCNMVQGQFCGDCLYTRYGEHVLEALQNLNWICPVCRGICNCSLCRQAKGWAPTGFMYRKVSSLGYKSVAHYLIQTRRAGANVEENAEASVPVSAEKSLPISDVEGLSNECPGGDENKCVGSLKPQPEGDGGQVSAKRSLLFSDVQDQQDKDECLDAMKHQSGSDRGQVSAKRSLPFSDVQVQDQDGKVASSDSMITTAPSTEVKDCIARRLRPRVQKS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0229 402 PANTHER OS05G0300700 PROTEIN 17 313 IPR040221 GO:0006355
Lele49g0229 402 MobiDBLite consensus disorder prediction 1 30 - -
Lele49g0229 402 MobiDBLite consensus disorder prediction 1 126 - -
Lele49g0229 402 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 160 256 IPR018866 -
Lele49g0229 402 MobiDBLite consensus disorder prediction 108 126 - -
Lele49g0229 402 MobiDBLite consensus disorder prediction 74 103 - -
Lele49g0229 402 MobiDBLite consensus disorder prediction 346 384 - -
Lele49g0229 402 MobiDBLite consensus disorder prediction 31 52 - -
Lele49g0229 402 MobiDBLite consensus disorder prediction 343 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0229 Lele-ChrLele49 1353778 1356444 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0229 49 1353778 1356444 Lele51g0243 51 1380056 1382646 hybridization
Lele49g0229 49 1353778 1356444 Lele52g0244 52 1447140 1450865 hybridization