Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0163 ATGACTCTCGGTCTGATCAATGCGAACCCCGTAGTTCATGCGAAAAAGGAGAGAGTTGCTCGCACCGAAGATCCCCACGCCGATGATGCCGTTGACCCCCTCGAAATTTATGATATCCTCCGTGTTTTTTCTTCCTATTCTTCTTTTTCCCCTTCTCATTTTCCTCACAAACGCGAGCACAGTGCTACTTTTCGCTCTGCTTTTGTTATATCTGATGTGAAAACTGCGATCCTTGACTTCGAATCTGCAAATTTCGTGAGAGATATCAGGGATCCGGAACACCCCTATTCCTTAGAACAACTCAGCGTCCTCTCCGAGGAATCAATCACAGTTGATGACAAATTGGGCCGGATTCTGATAACTTTTACACCGACTATCCAGCACTGCAGCATGGCAACAGTAATTGGTCTTTGTCTGAGAGTTAAGCTAAAACACTTTTTCCCTCCTCACTACAAGGTGGACATCAAAGTATCTCCAGGATCTCACGCAGATGAAGAATCAGTCAATAAGCAGTTAAATGACAAGGAAAGAGTTGCTGCCGCCTTGGAGAATCCCAACCTCCGCCAGCTTGTTGACGAGTGTCTCTACTCTAATGAACTATGA 603 0.4544 MTLGLINANPVVHAKKERVARTEDPHADDAVDPLEIYDILRVFSSYSSFSPSHFPHKREHSATFRSAFVISDVKTAILDFESANFVRDIRDPEHPYSLEQLSVLSEESITVDDKLGRILITFTPTIQHCSMATVIGLCLRVKLKHFFPPHYKVDIKVSPGSHADEESVNKQLNDKERVAAALENPNLRQLVDECLYSNEL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0163 200 Pfam Iron-sulfur cluster assembly protein 87 149 IPR002744 -
Lele49g0163 200 Gene3D - 165 195 - -
Lele49g0163 200 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 85 170 IPR034904 -
Lele49g0163 200 Gene3D - 74 163 IPR034904 -
Lele49g0163 200 PANTHER UNCHARACTERIZED 1 198 IPR039796 GO:0106035
Lele49g0163 200 FunFam Protein AE7-like 1 72 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0163 Lele-ChrLele49 990639 992529 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0163 49 990639 992529 Lele51g0178 51 1020744 1022635 hybridization
Lele49g0163 49 990639 992529 Lele52g0182 52 1082104 1084110 hybridization