Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1297 ATGAAATACCCAGACCACTTCATTCAGAGGAGCCGTAACCAAGCTTGTACTTCTCGTTTCTTTTATTGTTTTTGGCTTTTCTTATTGGTTACTGTGAGAAAGCAACGACTTGTATCGTTTTTGGCTTTTCTTATTGGTTACTGTGAGAAAGCAACGACTTATAACCGTTCAATGTGGAGCACAGATGACGTGAATGGGTCAGTCAATGCGGCTTCCTCCGGTGTTGTTCGTGCCTGCATTCTTGACGCGCCATGGGGTAGAAGTAAAAAATCCACTGGGACTCTCTTCACAAGACGGAACAAATTTGTAAAGAATAGAATTCAAGCATCAGCTGAGGGTTCTGTGGAGCCAAATGGAAAGGCGTCTTATCATCCATTTGAGGAATATGCTAGTCCAGCATTAGAGAATGGTGGAGATGCCAGACTTACTACAGCAGAAACAAGTAGGACAATTATTGAGGTTAACAGTAAGGCAACACTACTGTTCTCAAGCTTGATCAACAATGAAGCTCATGAAAATATTATTTGGCCAGATATGCCCTATTTGACTGATGAGCATGGAAGTAATTTTGTAATCATGCCTACACTGTTCTGTAAGTTACAGCAAGTCATTGTTGGTGTGGATACCACGGAAATGATCGATGAGATGGACTTATCAGGTCCTTCAGAAATTGACTTTGGGATTGAAGAATTTGGTGATCAAGATGGTAGTGATATAGAGGACAATGATGAAGCGGATGAAGATGAAGATGGGAATGATGATTATGATTCGGAATGGGTTGCAGTTCTTTCAGATGAGGACGATCAAGATGATGCTGATGAAACACTTGAAGGCTGGGCAAAATTGGAGTCTACGCATACTTATTCTGATCCCATGTATTTTGCCAAAAAGTTGGCGGAGATTGCTTCTGGTGATCCAATTGATTGGATGGAACAGCCTCCTGCTTGCCTAGCCATCCAAGGTCTGTTAAGACCTGCCTTTATTGAAGAACAATCTGTCATACAGAAGCATTTATCTACCAATCTGTCCAGTAATACTGACATGAATGAACCCAAAGGAAATAGTGGAGAAAATCTTGGTGCAATTAATGGTCAAGTGCATAATCCACTGTCATCCAGAGAAAATGCATCACAGGGGGAGAATAATGATAATAGTATTCATGCCAATGTAACTTCATTTTTCAAACTGGAAATGGTCAAGATTCAGCTTTTTTCAGCCCAAGGACATCCGACTGACCTTGAAGTAGAAGACTACATGAAAGCTCAACCTGATGCGATTGCTCACTCAGCTTCTAAGATCATGTCTCGTCTGAAAGCTGATGGTGAAAAGACGACGCAAGCCTTGAAGTCTCTCTGTTCGAGATGTAAGGGCATACAAGTGGAGGAAGCACAACTTATCTGTGTGGACTCCCTTGGATTTGACATACGGGTTTGCTCAGGAACTCAAGTTCAAACACTGAGATTTGCATTTAAGAAAAGGGGTTCAAAAGATAGTTGTGATGCTAAGAGGGTGCAACTGGGGAATTCTTCTTGGGATGTTGACCTTGCACATATTTAA 1557 0.4149 MKYPDHFIQRSRNQACTSRFFYCFWLFLLVTVRKQRLVSFLAFLIGYCEKATTYNRSMWSTDDVNGSVNAASSGVVRACILDAPWGRSKKSTGTLFTRRNKFVKNRIQASAEGSVEPNGKASYHPFEEYASPALENGGDARLTTAETSRTIIEVNSKATLLFSSLINNEAHENIIWPDMPYLTDEHGSNFVIMPTLFCKLQQVIVGVDTTEMIDEMDLSGPSEIDFGIEEFGDQDGSDIEDNDEADEDEDGNDDYDSEWVAVLSDEDDQDDADETLEGWAKLESTHTYSDPMYFAKKLAEIASGDPIDWMEQPPACLAIQGLLRPAFIEEQSVIQKHLSTNLSSNTDMNEPKGNSGENLGAINGQVHNPLSSRENASQGENNDNSIHANVTSFFKLEMVKIQLFSAQGHPTDLEVEDYMKAQPDAIAHSASKIMSRLKADGEKTTQALKSLCSRCKGIQVEEAQLICVDSLGFDIRVCSGTQVQTLRFAFKKRGSKDSCDAKRVQLGNSSWDVDLAHI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1297 518 Gene3D - 422 515 IPR037119 -
Lele48g1297 518 PANTHER CREG1 PROTEIN 96 497 - -
Lele48g1297 518 MobiDBLite consensus disorder prediction 223 255 - -
Lele48g1297 518 MobiDBLite consensus disorder prediction 340 384 - -
Lele48g1297 518 SUPERFAMILY FMN-binding split barrel 391 493 - -
Lele48g1297 518 MobiDBLite consensus disorder prediction 228 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1297 Lele-ChrLele48 17232428 17238257 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1297 48 17232428 17238257 Lele48g1297 48 17232428 17238257 ECH
Lele45g0135 45 1226170 1231489 Lele48g1297 48 17232428 17238257 hybridization
Lele46g0160 46 971338 980308 Lele48g1297 48 17232428 17238257 hybridization