Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1263 ATGCAGCGCCGAAACGCCGCCGTTTTTCCCAGATTACCTACCTTGCCTCTTTCTTCTCCTTCTTCCCCTTCCTCACGCTTCCCTAACTCCCTCACTACTCTGACAAGCAGGAGCACCACCGGGAGGAAGAAACACTCTCAGAGAGCTTCCGGGTGGAGTGGGTGCAACTGGGTTATTCTCAAGCCAATGCCTGCTTCTTCTTCTCTCAAATCTAGCTGTGAGGATAGTGATATTAACAGCAACAATAATGGCTCTCTTCGTAATTTCAAGCTGAACGAGTCCACCTTCTTGGCTTCCCTCATGCCCAAGAAAGAGATTGGTGCTGATCGCTTTCTCGATGATCATCCGGAGTACGATGGCCGCGGTGCCATCATCGCTATCTTCGATTCCGGTGTAGACCCGGCAGCTGCTGGATTACAGGTTACCTCTGATGGGAAACCAAAAATTCTTGACATCCTTGATTGCACTGGGAGTGGAGATATTGATACCTCAAAGTTGGTCAAGGCTGATGCTGATGGTCTTATCTGCGGGGCATCCGGCTCATCTTTGGTTATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCATGTCGGTTATAAATTGGTTTATGAGTTCTTCACTGATACATTGACTTCTAGGTTGAAGAAAGAGAGAAAGAAAAAGTGGGACGAGAAAAACCAGGAGGAAGTTGCTAAGATTGTCAAAGAACTTGATGATTTTGATAAGAAACACATCAAAGTAGAGGATGCAAAGCTAAAAAAGGCTCGTGAAGATATCCAGAATAGACTTGACATTCTTAAAAGGCAGTCTGAGAGCTACGATGACAAAGGGCCTGTCATAGATGCTGTTGTTTGGCATGATGGAGAGGTGTGGAGGGTGGCTCTTGACACTCAGAGTCTTGAGGATGATCCAGATTGTGGGAAGCTTGCTGACTTTATTCCATTAACTAATTATAGGACAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTTCATTTGTTGTTAATGTCTATAATGATGGGAACACCTTAAGTATTGTAACAGACTGCTCCCCCCATGGTACCCATGTTTCTGGTATAGCTACTGCATTCCACCCGAAGGAGCCATTGTTGAATGGAGTTGCACCTGGAGCACAAATAATATCTTGTAAAATTGGGGACGCTCGCATAGGTTCAATGGAAACAGGAATTGGTCTGACACGGGCAATAATAGCTGCTGTGGAGCATAAATGTGATCTAATCAACATGAGTTATGGTGAACCAACATTACTTCCTGACTATGGACGCTTTGTTGACCTTGTGAATGAAGCTGTAAACAAGCATCGGCTGATATTTGTAAGCAGTGCTGGAAATAGTGGCCCAGCATTGAACACTGTTGGTGCTCCTGGTGGGACATCTTCAAGCATAATAGGTGTTGGTGCGTATGTCTCTCCTGCTATGGCAGCTGGTGCACACTGCGTAGTAGAACCTCCATCTGATGGGCTTGAATACACGTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTCTGCATAAGTGCTCCAGGTGGTGCAGTTGCTCCTGTTCCTACATGGACTCTTCAACAGCGCATGCTAATGAATGGGACGTCAATGGCATCTCCTTCAGCCTGTGGGGGCATTGCATTACTCATAAGTGCAATGAAGGCCGAGGGAATTCCAGTAAGTCCATATATTGTGAGGAAGGCACTTGAGAATACAGCAATTCCCATAGGTGATTCAGCTGAGGAAAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCCTATCAATATCTACAGCAATCTCAAAATGTTCCACGTGTTTGGTATCAAGTAAACATCAAGCAGTCTGGAAAAGAAAATCCATCATCACGAGGCATCTACCTCAGGGAGGCTAGTGCTTGCCGGCAACCTACTGAGTGGACAGTGACAGTCAGTCCAAAATTTCATGAAGATGCCAAGAATTTTGAGGATTTAGTACCGTTTGAGGAGTGCCTTGAGTTACATTCTACTGATAATACAGTTGTGAAGGCTCCTGAATATCTACTGCTCACTCATAATGGGCGCACCTTCAACACATTTGTTGATCCCACTAATCTGAGTGCTGGTCTGCACTATTATGAGGTCTATGGAATTGACTGCAAAGCACCATGGCGTGGTCCGCTTTTCAGAATTCCAGTAACCATAACCAAGCCCAAGGCTGTCACAAACCAACCTCCACAAGTTGTATTATCAAAAATGTTATTCAAGCCAGGGCATATTGAAAGGAGATATATAGAAGTCCCACATGGAGCATCTTGGGTTGAAGCAACTATGAAAGCATCAGGTTTTGATACAGCTCGAAGATTTTTTGTAGACGCTGTTCAGATATGCCCATTGCAAAGACCCCTGAAATGGGAGAGTTTGGCAACATTTTCTTCTCCTTCTTCCAAAAGCTTTGCCTTCAAGGTGACAGGCGGTCAGACACTGGAACTAGTCGTTTCTCAGTTCTGGTCAAGTGGCATAGGAAGTCATGAGACTACCAGTGTGGATTTTGAGGTCATGTTTCATGGTGTAAAAGTTAATCAAGAGGAAATATTACTTGATGGAAGTGAAGCACCAGTAAGAATTGAAACTGAAGCGCTACTGGCTTCTGAGAAACTTGCTCCTGTGGCAGTTCTAAACAAGATAAGGGTTCCATATCGACCAATAGACGCAAAAATTACTGCACTCTCTACAGATCGTGATAGACTTCCCTCTGGAAAGCAGATACTTGCTCTGATCTTAACCTACAAGATCAAATTGGAGGACGGAGCAGAAGTGAAACCTCAAATAGCATTACTAAATAACCGGATATATGACACTGAATTTGAGTCTCAATTTTACATGATTTCTGACTCAAACAAGCGTATATATTCAAGTGGTGATGCCTACCCAGATTCAACAAAACTTCCCAAGGGTGAATACAATTTACAGTTATATTTGAGGCATGACAATGTCCAGATTTTGGAAAAGATGAAGCAGTTGGTGTTATTCATTGAGAGAAATTTGGAAGACAAGGATGCCATTCGCTTGGGCTTTTTCTCTCAACCTGATGGTCCTTTGATTGGAAATAGCACCTTTAAATCCTCAGCGTTAGTTCCAGGTATCAAAGAGGCAATTTATCTGGGTCCACCACCTAAAGATAAGCTTCCCAAGAATTCTCCACCAGGATCTGTACTAGTAGGAGCAATATCATATGGAAAATTATCAACTGGGGAGAATAGAAGTCCAGAAAAGCACCCTGTATCATATCGGGTTTCTTATATTGTCCCCCCTAAGGTTGAGGAAGACAAGGGAAAAGGTTCTTCCTTATCTGGAAAGAAGTCTGTTTCCGAGCGTTTAGAAGAAGAGGTAAGGGATGCAAAAGTAAAAGTGCTGGGGGGCTTAAAACAAGAAACTGAAGAAGAGTGCTTGGAATGGAAGAAGCTATCTGCCTCACTTAAGTCTGAATATCCCAAGCATACTCCTTTACTTGCAAAGATTTTGGATGGCTTGGTTTCTAGAAGTAATATCAAAGACAAAATCCGCCACAATGATGAGATAATTGATGCAGCAAATGACGTGATTGATAGTATTGACAGGGAAGAACTAGCAAAATTTTTTGCTTTGAAAAATGACACAGAAGATGAGGAAGCAGAGAAAATGAAGAAAAAGATGGAGTCAAACCGAGACCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAATCTTTAAAGGAGGTGGATATGCCATTGGCTTCATCGGGAACAGAAGGAGCAAAAAAATCCGTGGACCCTAAGACTGATGAGCAATCTGCACCTGGAGAGGGAACTCCTACGGACTTGTTTGAAGAGAACTTTAATGAACTGAAGAGGTGGGTTCAGGTGAAGTCCCCTAAATACGGAATCCTCCTAGTGACACGTGAGAGGCGTTGTCAGAGGCTTGGGACAGCATTAAAGGCATTAATGGACATTATTCAAGATGACTCAGAGTCACCCAAGAAGAAACTCTATGAACTAAAGCTCTCTTTGCTGGATGAGATCGGATGGACCCACTTGGCTAAGTATGAGAGACAGTGGATGCATGTTCGTTTTCCCTCAAGCTTGCCCCTTTTTTAG 4155 0.4373 MQRRNAAVFPRLPTLPLSSPSSPSSRFPNSLTTLTSRSTTGRKKHSQRASGWSGCNWVILKPMPASSSLKSSCEDSDINSNNNGSLRNFKLNESTFLASLMPKKEIGADRFLDDHPEYDGRGAIIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKLVKADADGLICGASGSSLVINTSWKNPSGEWHVGYKLVYEFFTDTLTSRLKKERKKKWDEKNQEEVAKIVKELDDFDKKHIKVEDAKLKKAREDIQNRLDILKRQSESYDDKGPVIDAVVWHDGEVWRVALDTQSLEDDPDCGKLADFIPLTNYRTERKYGVFSKLDACSFVVNVYNDGNTLSIVTDCSPHGTHVSGIATAFHPKEPLLNGVAPGAQIISCKIGDARIGSMETGIGLTRAIIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALNTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCISAPGGAVAPVPTWTLQQRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYIVRKALENTAIPIGDSAEEKLSTGQGLMQVDKAYQYLQQSQNVPRVWYQVNIKQSGKENPSSRGIYLREASACRQPTEWTVTVSPKFHEDAKNFEDLVPFEECLELHSTDNTVVKAPEYLLLTHNGRTFNTFVDPTNLSAGLHYYEVYGIDCKAPWRGPLFRIPVTITKPKAVTNQPPQVVLSKMLFKPGHIERRYIEVPHGASWVEATMKASGFDTARRFFVDAVQICPLQRPLKWESLATFSSPSSKSFAFKVTGGQTLELVVSQFWSSGIGSHETTSVDFEVMFHGVKVNQEEILLDGSEAPVRIETEALLASEKLAPVAVLNKIRVPYRPIDAKITALSTDRDRLPSGKQILALILTYKIKLEDGAEVKPQIALLNNRIYDTEFESQFYMISDSNKRIYSSGDAYPDSTKLPKGEYNLQLYLRHDNVQILEKMKQLVLFIERNLEDKDAIRLGFFSQPDGPLIGNSTFKSSALVPGIKEAIYLGPPPKDKLPKNSPPGSVLVGAISYGKLSTGENRSPEKHPVSYRVSYIVPPKVEEDKGKGSSLSGKKSVSERLEEEVRDAKVKVLGGLKQETEEECLEWKKLSASLKSEYPKHTPLLAKILDGLVSRSNIKDKIRHNDEIIDAANDVIDSIDREELAKFFALKNDTEDEEAEKMKKKMESNRDQLAEALYQKGLALAEIESLKEVDMPLASSGTEGAKKSVDPKTDEQSAPGEGTPTDLFEENFNELKRWVQVKSPKYGILLVTRERRCQRLGTALKALMDIIQDDSESPKKKLYELKLSLLDEIGWTHLAKYERQWMHVRFPSSLPLF 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1263 1384 ProSiteProfiles Serine proteases, subtilase domain profile. 105 603 - -
Lele48g1263 1384 Pfam Subtilase family 120 583 IPR000209 GO:0006508|GO:0008236
Lele48g1263 1384 PANTHER PEPTIDASE S8 94 1003 - -
Lele48g1263 1384 ProSitePatterns Serine proteases, subtilase family, histidine active site. 356 366 IPR022398 -
Lele48g1263 1384 Coils Coil 1144 1164 - -
Lele48g1263 1384 Coils Coil 250 277 - -
Lele48g1263 1384 Gene3D - 616 751 - -
Lele48g1263 1384 Coils Coil 1219 1246 - -
Lele48g1263 1384 Pfam Tripeptidyl peptidase II 883 1067 IPR022229 -
Lele48g1263 1384 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 100 582 IPR034051 GO:0006508|GO:0008240
Lele48g1263 1384 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Lele48g1263 1384 MobiDBLite consensus disorder prediction 1265 1293 - -
Lele48g1263 1384 MobiDBLite consensus disorder prediction 18 49 - -
Lele48g1263 1384 Gene3D - 1122 1384 - -
Lele48g1263 1384 MobiDBLite consensus disorder prediction 1 49 - -
Lele48g1263 1384 FunFam tripeptidyl-peptidase 2 isoform X1 103 188 - -
Lele48g1263 1384 FunFam Tripeptidyl-peptidase 2 164 225 - -
Lele48g1263 1384 FunFam Tripeptidyl-peptidase 2 homolog 280 613 - -
Lele48g1263 1384 Gene3D Peptidase S8/S53 domain 280 614 IPR036852 GO:0004252|GO:0006508
Lele48g1263 1384 FunFam Tripeptidyl-peptidase 2 616 747 - -
Lele48g1263 1384 SUPERFAMILY Subtilisin-like 100 613 IPR036852 GO:0004252|GO:0006508
Lele48g1263 1384 Gene3D - 164 234 - -
Lele48g1263 1384 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Lele48g1263 1384 PRINTS Subtilisin serine protease family (S8) signature 352 365 IPR015500 -
Lele48g1263 1384 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1263 Lele-ChrLele48 16999107 17015665 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1263 48 16999107 17015665 Lele48g1263 48 16999107 17015665 ECH
Lele45g0182 45 1501007 1521811 Lele48g1263 48 16999107 17015665 hybridization
Lele46g0201 46 1214238 1232221 Lele48g1263 48 16999107 17015665 hybridization