Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1258 ATGGCCTCCCACATTATTATCAGCTTCACCACTTTCCTCCTTCTCTCTCTCTCCTTCCATTCCTCTCTCGGATCAGGGATCGAGTGCGAGAAGCTGGACGAGAAGAGGTGCTCCTATGCGGTGTCATCTGAGGGAAAACGGTGCGTCCTGGAGAAGCAGGTGAAGAGGAGCGGCAAGGAACTCTACACGTGTCGCACATCGGAGATTGAAGCTGACAAAGTGAAGGACCACGTGGAGAGCGACGATTGCATCAAGGCATGTGGGTTGCACCGGAACACCCTCGGCATCTCCTCCGACGCTCTCCTCGACTCTCGCTTCACCCACAACCTCTGCTGCCCTCACTGTTACCACAACTGCCCCAACGTCGTCGACCTCTACTTCAACCTCGCCGCTGGCGAAGGAGTGTTTCTTCCCAAGTTGTGTGAGGCAGATGGAGCGAACGCACGGCGAGCAATGGCTGAGCTAAAAAGCTCTGGAATGGTGGCGCCCGGTCCTGTCAACTCCGTCAAGTTCGCCGCCACGGCTGAAACTCCTCAATCCCAACCTCTCAACTCTCTTCTCTTCGCCGACCCACCCGCAGTGGCTTCCCCACCATACGCCTATTAA 606 0.5644 MASHIIISFTTFLLLSLSFHSSLGSGIECEKLDEKRCSYAVSSEGKRCVLEKQVKRSGKELYTCRTSEIEADKVKDHVESDDCIKACGLHRNTLGISSDALLDSRFTHNLCCPHCYHNCPNVVDLYFNLAAGEGVFLPKLCEADGANARRAMAELKSSGMVAPGPVNSVKFAATAETPQSQPLNSLLFADPPAVASPPYAY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1258 201 PANTHER PAR1 PROTEIN 7 182 IPR009489 -
Lele48g1258 201 Pfam PAR1 protein 27 181 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1258 Lele-ChrLele48 16955520 16956414 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1258 48 16955520 16956414 Lele48g1258 48 16955520 16956414 ECH
Lele45g0185 45 1554131 1557494 Lele48g1258 48 16955520 16956414 hybridization
Lele46g0204 46 1267675 1268551 Lele48g1258 48 16955520 16956414 hybridization