Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1225 ATGTTGAGGATGAGGAATAATAACAATAACAACAAGACAAATGGGTTTTCGCCCATGAACGGAAGCTCCGCCGTCGCCGGTGCGGAGTCAAGGCCTCATGAGTGGGAGATGAGACCGGGAGGAATGCTGGTCCAGAAGCGAACCGCCGACTCGGGTCGGAACACAGCTCTGGTGCCGACAATTAGAGTTAGGGTTAAATATGGGTCAATCTACCACGAAGTCAACATTAGTTCTCAAGCTACATTTGGGGAATTGAAGAAGACGCTGTCAGGGCCAACAGGGTTACACCACGAAGACCAGAAGCTATTTTTTAAAGCCAAGGAGAGAGATTCAAAGGCGTTTCTTGACATCACAGGAGTTAAAGATAAATCAAAGCTAGTTCTAATGGAGGACCCCATTAGTCAAGAGAAGAGGTTCCTGGAGATGAGGAAGAATGTGAAGATGGAGAAAGCTGCAAAATCTATCTCTCAAATCAGCTTGGAAGTAGATAGGCTCGCAGGACGGGTGTCTGCTCTGGATTCAATAATTAGTAAAGGTGGCAAAGTCGCAGAATCAGATGTGCTTGGTCTTATTGAACTTTTAATGAACCAATTGCTCAGGTTGGACGGCATTATTGCCGATGGAGATGTCAAATTGCAGAGAAAAATGCAGGTGAAAAGAGTTCAGAAGTATGTTGAAACTCTGGACATGCTGAAGATCAAGAACTCTATGCCCAGTAACAATGGAAGGGATGCTCTAATGCAGCAGCCTCAGCAAAAGAAACATTCAAATGGCCCAAGCCGATTAGCCCCAATTCAAGAACAGCCTTCACAAATGCAATCAAATGGGCATATTGATCTATTAACACCAACTGAAGAGCCACAATATCCTCAACCAAGGAACTCAAATGGGCATTCCCCATTGATTCAGCAGCAACAAGCACCAGTGGATTCTTCTTCAACGTCAGGAGTTGTAGTGACCACCAAGTGGGAAACATTCGAGCCTGCTCCGCCATTGATCCCGGCAACATCCTCAACCTCGGCGAACAATAACTCAGTTCATCCCAGGTTTAACTGGGAATTCTTCGACTAA 1071 0.4556 MLRMRNNNNNNKTNGFSPMNGSSAVAGAESRPHEWEMRPGGMLVQKRTADSGRNTALVPTIRVRVKYGSIYHEVNISSQATFGELKKTLSGPTGLHHEDQKLFFKAKERDSKAFLDITGVKDKSKLVLMEDPISQEKRFLEMRKNVKMEKAAKSISQISLEVDRLAGRVSALDSIISKGGKVAESDVLGLIELLMNQLLRLDGIIADGDVKLQRKMQVKRVQKYVETLDMLKIKNSMPSNNGRDALMQQPQQKKHSNGPSRLAPIQEQPSQMQSNGHIDLLTPTEEPQYPQPRNSNGHSPLIQQQQAPVDSSSTSGVVVTTKWETFEPAPPLIPATSSTSANNNSVHPRFNWEFFD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1225 356 Gene3D - 60 130 - -
Lele48g1225 356 SMART BAG_1 154 232 IPR003103 GO:0051087
Lele48g1225 356 SUPERFAMILY BAG domain 114 236 IPR036533 GO:0051087
Lele48g1225 356 MobiDBLite consensus disorder prediction 235 315 - -
Lele48g1225 356 FunFam BAG family molecular chaperone regulator 1 59 130 - -
Lele48g1225 356 MobiDBLite consensus disorder prediction 1 24 - -
Lele48g1225 356 Pfam BAG domain 155 230 IPR003103 GO:0051087
Lele48g1225 356 ProSiteProfiles Ubiquitin domain profile. 59 129 IPR000626 GO:0005515
Lele48g1225 356 Gene3D BAG domain 131 236 IPR036533 GO:0051087
Lele48g1225 356 PANTHER BCL2-ASSOCIATED ATHANOGENE 18 327 IPR039773 GO:0051087
Lele48g1225 356 ProSiteProfiles BAG domain profile. 154 232 IPR003103 GO:0051087
Lele48g1225 356 CDD Ubl_AtBAG1_like 60 129 - -
Lele48g1225 356 MobiDBLite consensus disorder prediction 1 36 - -
Lele48g1225 356 SUPERFAMILY Ubiquitin-like 53 135 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1225 Lele-ChrLele48 16636778 16638329 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1225 48 16636778 16638329 Lele48g1225 48 16636778 16638329 ECH
Lele45g0221 45 1855197 1856767 Lele48g1225 48 16636778 16638329 hybridization
Lele46g0245 46 1585080 1586631 Lele48g1225 48 16636778 16638329 hybridization