Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1172 ATGGAGAACAGCTTCTGCCTATTCTGTGGATGCGTTCAGCAGGCAAACATAGGAGTTGTGGAAAGATGGGGTCGTTTCTACAAGTTGGCTGAGCCTGGTTTTCACTTTTTCAATCCACTCGCCGGAGAATGCCTTGCCGGCCTCCTCTCCACCAGGGTCTCATCGCTTGACGTCCGCGTCGAGACCAAAACCAAGGATAATGTCTTTGTGCAGTTGCTTTGCTCAATTCAGTACCGAGTTGTCAAAGAAAATGCTGATGATGCATTCTATGAGCTGCAAAACCCCAAAGAACAGATCCAGGCTTATGTTTTTGATGTGGTTCGTGCTCTTGTTCCAAGAATGAATTTGGATGAACTCTTTGAACAAAAAGGTGAAGTTGCCAAAGCTGTGTTGGAGGAACTTGAAAAGGTGATGGGAGAATACGGATATAGCATAGAACACATATTGATGGTTGATATTATACCTGATAACGCTGTACGCCACGCAATGAATGAGATCAATGCAGCTCAAAGATTGCAGCTTGCTAGTGTGTACAAAGGCGAAGCTGAAAAGGTGCTTCTGGTTAAAAAAGCCGAAGCCGAAGCTGAAGCTAAGTTTCTGGGTGGAGTTGGCGTGGCCAGGCAGAGGCAAGCTATCACAGATGGTTTGAGAGAGAACATATTGAATTTCTCTCACAAGGTGGAAGGCACATCTGCTAAGGAGGTTATGGATCTTATCATGATTACTCAGTACTTTGACACAATTAAAGACCTTGGAAACTCATCAAAGAACACCACGGTTTTTATACCCCACGGACCTGGCCATGTCAGGGATATCTGCGAGCAGATACGCAATGGAATGATGGAAGCTACCAGTGCTCAAGTAAATATTGAATGA 876 0.4486 MENSFCLFCGCVQQANIGVVERWGRFYKLAEPGFHFFNPLAGECLAGLLSTRVSSLDVRVETKTKDNVFVQLLCSIQYRVVKENADDAFYELQNPKEQIQAYVFDVVRALVPRMNLDELFEQKGEVAKAVLEELEKVMGEYGYSIEHILMVDIIPDNAVRHAMNEINAAQRLQLASVYKGEAEKVLLVKKAEAEAEAKFLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDICEQIRNGMMEATSAQVNIE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1172 291 SMART PHB_4 7 167 IPR001107 -
Lele48g1172 291 CDD SPFH_like_u4 11 280 - -
Lele48g1172 291 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 6 286 - -
Lele48g1172 291 Gene3D Band 7 domain 47 169 IPR036013 -
Lele48g1172 291 Pfam SPFH domain / Band 7 family 12 183 IPR001107 -
Lele48g1172 291 SUPERFAMILY Band 7/SPFH domain 48 171 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1172 Lele-ChrLele48 16257006 16259462 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1172 48 16257006 16259462 Lele48g1172 48 16257006 16259462 ECH
Lele45g0277 45 2264072 2266182 Lele48g1172 48 16257006 16259462 hybridization
Lele46g0301 46 2001389 2003854 Lele48g1172 48 16257006 16259462 hybridization