Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1171 ATGGCTTCCTGGTCTGCTGAAAATGCCACCAAAGCCTATCTCTCTGCTTTCAAAATGGGGGAAAGAAGTAAAGAACCAGACGTGACAGAGTTCATATCAGCAATAGCTGCAGGGAACAATGCACAAATAATGGTGGTGGTGACGTCATCTGCATCATCAGTCCCAGACTCCACAATCTTACTTGCCATGTTGGCGGCGGCTCACCAAACTCGAGGCCGAGTGATCTGCATAGTCGACACCAGCCCCGACCACTTTAAACAACCATCCAACATCATCGCAGGTCATCATGATCAGGTGGAGTTCCTCATCGGACATACTCAGCAGCTGCTAATATCAGAGCCATGTAACAAGGCAGACTTCGTAGTTGTCGACTGTGATCTCGAGAACCATGAAGAGATCTTCAAAGCCGCCGTGTGTGTGGCGGAGAAGAAGAAGAAGAAGACGGTGGTTATGGGGTACAATGCGATGTGTAAGAAGGGTAGGACGGCGGCTTCTTGGGGGCATTATTGTGGGACAAGGACTGAGTTATTGCCAATAGGAAAAGGGTTGCTAGTGACTAGGTTTGGAGATTTTGGTGGGAATAATAATAATGTTATTGTTGGGAGTACGAAATATAGTGGAAGTGGATTGGGAAAATTTAGGAGTCGTTGGGTTGTCAAGGTTGATAAATGTACTGGCGAAGAACATGTTTTTAGGGTTAGATTGCCACATGATAAGGTTGTTCCCGCATGA 732 0.4658 MASWSAENATKAYLSAFKMGERSKEPDVTEFISAIAAGNNAQIMVVVTSSASSVPDSTILLAMLAAAHQTRGRVICIVDTSPDHFKQPSNIIAGHHDQVEFLIGHTQQLLISEPCNKADFVVVDCDLENHEEIFKAAVCVAEKKKKKTVVMGYNAMCKKGRTAASWGHYCGTRTELLPIGKGLLVTRFGDFGGNNNNVIVGSTKYSGSGLGKFRSRWVVKVDKCTGEEHVFRVRLPHDKVVPA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1171 243 Gene3D Vaccinia Virus protein VP39 7 187 IPR029063 -
Lele48g1171 243 PANTHER DUF1442 FAMILY PROTEIN 1 232 IPR009902 -
Lele48g1171 243 Pfam Protein of unknown function (DUF1442) 4 232 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1171 Lele-ChrLele48 16249336 16250535 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1171 48 16249336 16250535 Lele48g1171 48 16249336 16250535 ECH
Lele45g0278 45 2271874 2273316 Lele48g1171 48 16249336 16250535 hybridization
Lele46g0302 46 2010944 2012192 Lele48g1171 48 16249336 16250535 hybridization