Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1110 ATGGCCGGGAAAGCTGAACCCTTGAACGGGACTGCAAAATCTGGATCGAATCAGAGTGGTCAAGCAGCAATGCAGGCGTCGGCATTGAAGGCCGATCTGTCGAACATCCTTTCTTTGAAGAGTTTTAAGCTGAAAACCAAGCAGCAGGAGCTGCTGATCCGGGTTTCCATCCTATTGCTCGTCTATGTCTTGGCTTTCATCACTCGGCTCTTCAGTGTTCTGCGGTACGAGTCCATGATCCATGAGTTCGATCCTTACTTTAATTACCGGACCACGCTTTTCTTGACTGAGAAAGGTTTCTATGAGTTCTGGAACTGGTTTGATTCTGAGAGTTGGTATCCTCTGGGTCGTATCATTGGAGGCACTCTTTACCCGGGTCTCATGGTCACGGCCGCTTTAATTTACTGGGGTTTGCGATTTCTGAGGTTTGCGGTTCACATCCGTGAGGTCTGTGTGTTAACAGCACCGTTTTTTGCATCGAACACTACCTTGGTTGCTTATTTCTTTGGTAAAGAGATTTGGGATTCGGGTGCCGGTCTTGTTGCTGCAGCATTGATTGCTATTTGTCCTGGGTACATTTCTAGGTCGGTGGCTGGATCATATGATAATGAGGGTGTTGCCATTTTCGCCTTGTTGTTGACGTTTTACTTGTTCGTGAAGGCGGTGAATACAGGGTCGCTTGCATGGTCTTTAGCTTCTGCTTTTGGGTACTTCTACATGGTTTCTGCTTGGGGTGGTTACGTGTTTATCATTAATCTGATCCCACTTTATGTGTTGGTTCTTTTAATCACGGGAAGGTATTCCATGAGACTGTATGTTGCTTATAACTGCATGTATATTTTGGGAATGTTGCTTGCAATGCAAATTCGATTTGTTGGATTTCAGCACGTACAATCTGGAGAGCATATGGCTGCTATGGGCGTGTTTTTCTTGATTCAGGTATTTTACTTCTTGGATTGGGTGAGGCATTCTCTTGCTGATGCAAAATTGTTTCAGGCCTTTTTGAGGATCACTGTAACTACTGCTGTGAGTGTTGGTGTCATTGCTTTGGGAGTAGGCACAGCATCTGGTTATATTTCTCCATGGACAGGAAGGTTCTACTCCTTGCTTGATCCAACCTACGCTAAGGATCATATTCCAATCATTGCATCTGTCTCTGAGCATCAGCCAACTGCTTGGTCATCTTTTATGTTTGATTTCCACATCCTGCTGTTTTTCTTTCCTGCTGGGCTCTACTTTTGCTTCAAGCGGCTGTCAGACGCAACAATTTTCATAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGCGTGATGGTTCGATTAATTCTTGTTGCTACACCTGCAATATGCCTTATTAGTGCTATTGCAGTTTCTGCCACTGTGAAGAATTTGGCTCAGCTGGTTAGGACCAAAAGCAAAGCTGTTCAGAGTGGTTCTAGCAAAGGAACTAGTACTGTAAAAGGTTATTCCAAGGGTTTGGTTGATCACTCCCAGCCTTTCCAAAGAAATGGTGCCATTGTGTTACTTCTTGGTGCCTTCTATCTGCTGAGCAGATATGCTACTCACTGTACCTGGGTCACATCTGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGGGCCCATGGTAACAGGGTAATATTTGATGATTATCGTGAGGCATATTTTTGGCTTCGTCAGAATACTCCCCAAGATGCTAAGGTGATGTCATGGTGGGATTATGGTTACCAAATCACTGCCATGGGAAATAGAACAGTCATTGTTGACAACAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCTTCTTACGAAGATGAGGCTTATGAGATAATGAAATCACTTGATGTGGATTATGTTTTAGTTGTCTTTGGTGGTGTTACTGGTTATTCTTCTGATGATATAAATAAATTTCTGTGGATGGTGAGGATTGGTGGTGGTGTTTTCCCAGTAATAAAGGAACCTGATTACCTTGTCAATGGGGAGTATCGTGTAGATAAAGGGGCAGCTCCCAAGATGTTGAACTGTCTAATGTACAAGCTGTGTTATTATCGCTTTGGGGAGCTGACAACAGAATATGGCAAACCACCTGGGTATGATCGTGCAAGAGGAGTTGAAATTGGGAACAAAGACATAAAGCTGGAGTATTTGGAAGAGGCATTCACTACACAGAATTGGATAGTTCGTATTTACAAAGTAAAACCACCTAAAAACAGGTGGTAA 2244 0.4363 MAGKAEPLNGTAKSGSNQSGQAAMQASALKADLSNILSLKSFKLKTKQQELLIRVSILLLVYVLAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAALIYWGLRFLRFAVHIREVCVLTAPFFASNTTLVAYFFGKEIWDSGAGLVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYILGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLIQVFYFLDWVRHSLADAKLFQAFLRITVTTAVSVGVIALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFFFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAICLISAIAVSATVKNLAQLVRTKSKAVQSGSSKGTSTVKGYSKGLVDHSQPFQRNGAIVLLLGAFYLLSRYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPQDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMKSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLCYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1110 747 Gene3D - 550 699 - -
Lele48g1110 747 Pfam Oligosaccharyl transferase STT3 subunit 53 533 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lele48g1110 747 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 549 701 - -
Lele48g1110 747 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 39 746 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1110 Lele-ChrLele48 15818667 15822442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1110 1 746 Miscellaneous Gene Families AT1G34130 86.230 0.0 1306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1110 48 15818667 15822442 Lele48g1110 48 15818667 15822442 ECH
Lele45g0348 45 2762837 2766835 Lele48g1110 48 15818667 15822442 hybridization
Lele46g0377 46 2520641 2524451 Lele48g1110 48 15818667 15822442 hybridization