Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0163 ATGCAGTTACCTATGCAAGAGATTCCAAAGATTCTTATGCAGCGACATACAGATAAAGGAAGATCGGGGAACACCGATGTAGCCATCAACAAAGCAGATCATACGGAGGCATTCAAGACAGGCTTTTTCGCCATTGATGATCTTTATCAGAAACCAAGTTTTCTACTGTCACTTCATAGCGCAGGGACTAAGATCTTCAAGGTGAAATTGGGTTCTGAGAAAGAAGAACAAGTGAAAGCTTTAGGAGTTTGTCACTTGGACACATCTGAGTGGAGTCCTGATCATGTTTTGTTTAAGCAACTTGGATTCAAACCAGGGGAAGCTCCTGTGTGTCATTTCTTCCCAGTGAAACATCTCATGTGGATTCCTCTTCCTTCAAAAGCCACCATGTGA 393 0.4249 MQLPMQEIPKILMQRHTDKGRSGNTDVAINKADHTEAFKTGFFAIDDLYQKPSFLLSLHSAGTKIFKVKLGSEKEEQVKALGVCHLDTSEWSPDHVLFKQLGFKPGEAPVCHFFPVKHLMWIPLPSKATM 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0163 130 Pfam BURP domain 61 122 IPR004873 -
Lele48g0163 130 ProSiteProfiles BURP domain profile. 1 124 IPR004873 -
Lele48g0163 130 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 61 123 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0163 Lele-ChrLele48 1854904 1855691 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1253 45 22494938 22497581 Lele48g0163 48 1854904 1855691 hybridization
Lele46g1345 46 20528378 20529749 Lele48g0163 48 1854904 1855691 hybridization