Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0109 ATGATGAAGTTGAACCCCCATGCTCCTTCATTCGTTCCATCCCACACCTCCGTGGAACCTCACCATCAAGGCTACGTTGCTCCGTCGCCGCCACAAGTAACTCAACCTTTTCCTCTTCCTCCTCCCTATCACCAACGACCTTGTTTCCATGCAGTGGTAAGAGAAGATGTTCCTCATCTTCATCCCGAGACTAAGAGGCAAGAGGATGGCTCTAAAACGTATTCATGGCCTCGGTATGTCCATGCAATGAACAATGGTTATAGAAGAAGGATAGCTCGCAACACCCACGCGTTTCGGCCACCACCGTTGGCTCGCCGGCCAAACGGCACAGCCGGTTGCGATCGCCAAAATAAAGACGGGACTTTGGGAGACTTTAAGGTTTCTCCTAGGCTTAAGAAGACGAAACATCCTTTGGTTCCTGTGAAACCTGAGGAGAGGAATACAACAATTATGATAAGAAACATACCCAATAGATACACTTACATACTTGATGCATGTTCCGATCTTTCTCTTCTTCCGAAGCTTTTTTCTGTTAAGCTAGCACAGCTTGAAAATTTTGATCATCGTGCTTGGCGGGCGATGCTGATCGACTTCTTGGATAACCATTGTTTGTCTGAGAATCAGAAACTAGCAGATAAAGAAGAAGGTGGTGAACCAAAAATCTCAGCCTTCGACATCGTGTATCTGCCGATAGATTTCATCACATGGTTGAACAAAAGGTACGGATTCGTGAACTTCGCGAATCCGGAGGCAGCTTGGAGGTTCTATGTTGCCACGACCAATAAGAAATGGGAATTCTTTCAATCTCCCAAGATCTGTGACAATGTCGCGGCACGGTTTCAGTGGATGGAAGGCAAGTCAGCGCCTGAAGAGCTGCAAATTCGTCTCTATGGGCAGAGTGTTTCTGTGTCTGTAATGTGTTTTGGGATATGGGTTTTAGATGAATCTTTCCCGTTTAATGGAAGAAGAGCACTGGTGCTGATACTGTCGATAAGTCACCTTACTGCAATGCCGCAGAATTTCTCAGATACATTCTTCAGTCCTGCAATCCCAAAATTTTGCACGGTTATGGCGGCAAATGCGCCATCCAGCCATCTCCTACACATTTTTCGTTCTCAACCGTCTTCTCTGCCTTCGATATCACCTTCTTCAACTTCTTTTGTTTCTTTTCTGAAACCTCTTCTGCTCTCATCCACCGTTACTTCTCCCACTGCTATACCTAAACGCCTTCGACAGATGCAAATTCTACCTCCTCGGAAATCCCTCTTTGCCTCTATCACTCACCTCTCTAATCCCATTTTCTCTCACACTTCCTTTTCACATGTGATTTCTGTTCCTCAGAGACATTGCGATGTTGTGGGAGTTGGAGATTTGGTGGACATTGCTGAGGACGATGAAGCAATTGAACCGTACAGTGAAGAGAGTGAGATTGAAAACAAAGATGAGGATACCGAGATGAGTAGGGGTTCAGATTTGTCGCCGTTGGAGAGAAACAGGGAGGAGAGGTTGAAGTTGCCGAGTCTCACTGTGAAGGAAAGGAAAGAGCTCGCCTCTTACGCTCATAGCTTGGGGAAAAAGCTAAAAAGCCAGTTGGTGGGCAAGTCTGGTGTTACTCCTAATGTTGCGACCTCTTTCGTTGAGACTCTTGAAGCTAACGAGCTTCTCAAGATCAAAATACACCGGAGTTGTCCAGGAGAGCTAGATGATGTGGTGAAGCAGTTGGAAGAAGCAACTGGTTCAGTGACTGTTGGTCAAATTGGTCGGACAGTGATTATATACAGGCCTAGTCTCACCAAATTGAAGGCAGAAGAGAAGAAGAAACAAGCACGAAAAGTGTTTCTAAGAAAACAGCTAAGACCAAAACTGAGTAAGGAACAAGGATCAAAGTTTTCACGGCGGAGATAA 1905 0.4567 MMKLNPHAPSFVPSHTSVEPHHQGYVAPSPPQVTQPFPLPPPYHQRPCFHAVVREDVPHLHPETKRQEDGSKTYSWPRYVHAMNNGYRRRIARNTHAFRPPPLARRPNGTAGCDRQNKDGTLGDFKVSPRLKKTKHPLVPVKPEERNTTIMIRNIPNRYTYILDACSDLSLLPKLFSVKLAQLENFDHRAWRAMLIDFLDNHCLSENQKLADKEEGGEPKISAFDIVYLPIDFITWLNKRYGFVNFANPEAAWRFYVATTNKKWEFFQSPKICDNVAARFQWMEGKSAPEELQIRLYGQSVSVSVMCFGIWVLDESFPFNGRRALVLILSISHLTAMPQNFSDTFFSPAIPKFCTVMAANAPSSHLLHIFRSQPSSLPSISPSSTSFVSFLKPLLLSSTVTSPTAIPKRLRQMQILPPRKSLFASITHLSNPIFSHTSFSHVISVPQRHCDVVGVGDLVDIAEDDEAIEPYSEESEIENKDEDTEMSRGSDLSPLERNREERLKLPSLTVKERKELASYAHSLGKKLKSQLVGKSGVTPNVATSFVETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVTVGQIGRTVIIYRPSLTKLKAEEKKKQARKVFLRKQLRPKLSKEQGSKFSRRR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0109 634 MobiDBLite consensus disorder prediction 469 499 - -
Lele48g0109 634 SMART CRS1_YhbY_2 508 594 IPR001890 GO:0003723
Lele48g0109 634 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 507 606 - -
Lele48g0109 634 Coils Coil 597 617 - -
Lele48g0109 634 Gene3D - 507 607 IPR035920 -
Lele48g0109 634 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 359 633 - -
Lele48g0109 634 MobiDBLite consensus disorder prediction 481 499 - -
Lele48g0109 634 SUPERFAMILY YhbY-like 508 596 IPR035920 -
Lele48g0109 634 MobiDBLite consensus disorder prediction 95 127 - -
Lele48g0109 634 Pfam RNA recognition motif 2 222 281 IPR007201 -
Lele48g0109 634 ProSiteProfiles CRM domain profile. 506 605 IPR001890 GO:0003723
Lele48g0109 634 MobiDBLite consensus disorder prediction 1 31 - -
Lele48g0109 634 Pfam CRS1 / YhbY (CRM) domain 508 594 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0109 Lele-ChrLele48 1486778 1493129 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1406 46 20877919 20879998 Lele48g0109 48 1486778 1493129 hybridization