Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0078 ATGAAGGTAGGATTCGGTACCATAACTTTTTTCATGAAGCCGGAATCACCATTCCCAGAAGAAGCATTGACGCCACCAAACCTTCTCGACTTGGGCATGGCTTCCATCAACAAGTTTTGGATTTTTTGTCTCGCTTTGTTTCTCCTCGCTTCCCCTCTCATGCAAGTTGCTAGGTGCCAGTCAGATTCAAATGAGGCTGCAGAGACCACCGAAGAAGTAAGCGATGTTGGAATTGTTGGTCAGGATACTCAGGATTCTGGGGATGAGAGCTACTCCTCTGCTCCAGGAATTGATACGCATGGCGTATTCCCAAAGAATGGTGCAAAATTGGTTACAGCTGGAGAAGAGACAGACCTTCTCGTTGGTGTGAAAAATGATGGGGAGGCAAACTTGAAGGTTATTGCAATTAAAGCTAGTGTTCACTTCCCATATAATCACCACTATGTTGTTCAAAATCTTACTTCTCAGGTTTTTAATTATGCTTCGGTGCCAGCCTCCGCACAGGGTACTTTTCCATATACATTTGCTGTAAGCCAATTCTTGCAGCCTGGAGCTTTTGATCTCGTTGGAACCATTATATATGAAATTGACCAGCATACATACCAAAGCACATTCTATAATGGCACTGTTGAAGTCGTTGAGGCAGGCAGCTTTCTAAGCATGGAGTCTGTTTTCCTTGTTACTCTTGGAATTGCCCTTCTTGTCCTCTCTATGCTATGGATTTATGGTCAAGTTCAAAATGCATCCAAGAAAACAAGGAAGGGCACAAAAGTTGAAGTTGGGACTAGGGCTACCTCTATGGATGAATGGCTTGAGGGAACTGCATATACCATGTCGAACAGCAAATCAAAGAAGAAAGATAAATAA 867 0.4314 MKVGFGTITFFMKPESPFPEEALTPPNLLDLGMASINKFWIFCLALFLLASPLMQVARCQSDSNEAAETTEEVSDVGIVGQDTQDSGDESYSSAPGIDTHGVFPKNGAKLVTAGEETDLLVGVKNDGEANLKVIAIKASVHFPYNHHYVVQNLTSQVFNYASVPASAQGTFPYTFAVSQFLQPGAFDLVGTIIYEIDQHTYQSTFYNGTVEVVEAGSFLSMESVFLVTLGIALLVLSMLWIYGQVQNASKKTRKGTKVEVGTRATSMDEWLEGTAYTMSNSKSKKKDK 288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0078 288 Pfam Translocon-associated protein (TRAP), alpha subunit 56 275 IPR005595 GO:0005789
Lele48g0078 288 MobiDBLite consensus disorder prediction 76 91 - -
Lele48g0078 288 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 41 286 - -
Lele48g0078 288 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele48g0078 Lele-ChrLele48 1232403 1236301 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1341 45 23084482 23087496 Lele48g0078 48 1232403 1236301 hybridization
Lele46g1434 46 21147043 21149949 Lele48g0078 48 1232403 1236301 hybridization