Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0072 ATGGGTTCTGGATGTTCCAAACAAATTCAGCGGAGAAAGGACATCCGGACCGAGAAGAAAGTTCTGGCTGATCTCAAAGTCTCCGGTGAAGACTATCCGGGCGCTGATTTTCTGCCACAAGATAGAAAAAACTGGATGTCTGAGCTGAACCCTGAGAAAGTCCATATCGACAAGATTGTGTGGCCAGGAACGCACGATTCTGCGACGAACAAAATCGGGATCCCTCTCATCACTCGTCCCTTCGCTCAATGCCAATCCTTATCAATCTACAAACAGCTCGCCTTGGGGACTCGGGTCCTCGACATCCGGATCGAACAGAACCGACGGGTCTGCCACGGAATACTCGCCACTTACAGCGTCGACGTCGTGATCAACGACATCAAGAAGTTCCTATCTGAAACTCAATCGGAGATCATAATCCTGGAGATCCGAACGGAGTTCGGGCACGAAGACCCGCCGGACTTCGACAAGTACTTGATTGATCAGCTGGGCGAGTTCCTGATCCACCAGGATGATCACGTGTTTGAGAAGACTATAGCGGAAGTGTTACCGAAGAGGATCATATGTGTTTGGAAGCCGAGAAAATCGGCTCGCCCTGGAGCAGGGAGTCCGCTTTGGAGTGCAGGGTATTTGAAGGATAACTGGATCGAGACTGATTTGCCGTCGACGAAATTCGAGAGCAACATGAAGCACCTGGGGGAGCAGCCGGCGGCGACGTCGAGGAAGTACTTTTACAGGGTGGAGAATACGGTGACGCCGGTGGCGGATAACCCAATCGTGTGCGTGAAACCAGTGACGGGAAGGATCCACGCCTATAACAGATTGTTTATATCGCAGTGTTATTCCAAGGGGATTGGAGACAGATTACAGGTATTTTCTACGGATTTTATAGATGAAGATTTTGTGGATGCATGCGTCGGGCTCACTCATGCAAGGGTCGAAGGCAAAGTCTGA 954 0.5063 MGSGCSKQIQRRKDIRTEKKVLADLKVSGEDYPGADFLPQDRKNWMSELNPEKVHIDKIVWPGTHDSATNKIGIPLITRPFAQCQSLSIYKQLALGTRVLDIRIEQNRRVCHGILATYSVDVVINDIKKFLSETQSEIIILEIRTEFGHEDPPDFDKYLIDQLGEFLIHQDDHVFEKTIAEVLPKRIICVWKPRKSARPGAGSPLWSAGYLKDNWIETDLPSTKFESNMKHLGEQPAATSRKYFYRVENTVTPVADNPIVCVKPVTGRIHAYNRLFISQCYSKGIGDRLQVFSTDFIDEDFVDACVGLTHARVEGKV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0072 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
Lele48g0072 317 SMART plcx_3 50 192 IPR000909 -
Lele48g0072 317 CDD PI-PLCXDc_plant 32 312 - -
Lele48g0072 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 62 184 - -
Lele48g0072 317 PANTHER UNCHARACTERIZED 31 310 - -
Lele48g0072 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Lele48g0072 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 76 174 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0072 Lele-ChrLele48 1189363 1190316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0072 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 73.270 0.0 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1440 46 21190768 21191721 Lele48g0072 48 1189363 1190316 hybridization