Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0045 ATGGAGAGGCTTCTATCCTCCTCTTCTCCCACTTCTCCCAAAATTAATCTGAGCCCTTCTACTTTTCTCAATCGAAAGATTCGATTCGATTCTGCTAGATTCATTTTTCCCACATCAGCGAGCTCCATTGTTAGGCGGCCCAGCTCAATTTCTTTCAAACATGAAAATCCATCTTCATTTTCGTTTACTACCCCCTCTTTTACTTCATCACTACCACCGATTAATTTGCAGTCCCTTTCTGCTTCTGGAGGCGGCTCTTCAGAAAGGTCGGCACGCGAACCCGCCTCTCTCAGTCAGGTCACAGATGGGGCTTTAGGACAACGGAAGGTGATAACAGCTCGAACAGTTGCAATCCTCGCTGCTCTTGTTATGATCTTAATCCAACCAGTCTTTGCTCCGGCAGCTTATGCAACTTTTCAAACTGCCACCAAGGCAGGTGGTCCTGCTGCAGCTGCAGTTGGTGGGAAACTAATTCGCACTGAGCTATTGAGTAGTGCTTGGACTGGTTTTTTGGCTGGTTGCTTACACACACTATCAGGGCCTGATCACCTTGCAGCTTTGGCTCCTTTGTCAATCGGTCGTACCCGAATGGAGAGTGCTGCTGTTGGAGCCCTTTGGGGTTGTGGCCATGATGCTGGTCAGGTTATATTTGGTTTAATCTTTCTAGTTCTGAAGGATCAGCTTCACATTGAGGTTATTCAAACTTGGGGCACTAGAGTAGTTGGCCTTACTCTGCTTGTGATTGGTGCTATGGGAATTAGGGAAGCTTCAGAAGTGCCTGCACCTTGTGTTGCCTTAGAAAATGGCGAATGTGATGTCAGTGTCTACGAATCGCTTGATAATCCAACTGGAGGAAAGAAGAAGATTGGCTTTGCTACTTTTGCCACAGGAATAGTTCATGGCCTGCAACCAGATGCATTGATGATGGTATTGCCTGCCCTAGCCTTGCCTTCTCGTTTGGCTGGTGCTGCATTTCTCATCATGTTCTTGCTCGGGACAGTTGTTGCAATGGGAAGCTATACAGTATTTATTGGTTCATGTAGCCAAGCACTAAAGGATAGAGTACCTAGAATAACTGAGAAACTCACTTGGGCTTCTTCCCTTGTTGCAATAGCCCTCGGATTGGCCATCATTATAAGCCAGTTTTTTGGGTTTAGCCTATATTAG 1167 0.4627 MERLLSSSSPTSPKINLSPSTFLNRKIRFDSARFIFPTSASSIVRRPSSISFKHENPSSFSFTTPSFTSSLPPINLQSLSASGGGSSERSAREPASLSQVTDGALGQRKVITARTVAILAALVMILIQPVFAPAAYATFQTATKAGGPAAAAVGGKLIRTELLSSAWTGFLAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGLIFLVLKDQLHIEVIQTWGTRVVGLTLLVIGAMGIREASEVPAPCVALENGECDVSVYESLDNPTGGKKKIGFATFATGIVHGLQPDALMMVLPALALPSRLAGAAFLIMFLLGTVVAMGSYTVFIGSCSQALKDRVPRITEKLTWASSLVAIALGLAIIISQFFGFSLY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0045 388 MobiDBLite consensus disorder prediction 78 99 - -
Lele48g0045 388 Pfam Cytochrome C biogenesis protein transmembrane region 215 360 IPR039447 -
Lele48g0045 388 PANTHER UNNAMED PRODUCT 112 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0045 Lele-ChrLele48 1032688 1034724 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1369 45 23283973 23289051 Lele48g0045 48 1032688 1034724 hybridization
Lele46g1465 46 21359590 21362589 Lele48g0045 48 1032688 1034724 hybridization