Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1195 ATGGATCACAGCGCCGATGCCCAACGCACGGACTTAATGACAATTACGCGGTTCGTGCTCAATGAGCAGTCGAAGCATCCTGAATCTCGCGGCGATTTCACCATCTTGCTCAATCACATTGTCTTGGGCTGCAAGTTCGTCTGCTCTGCTGTTAGCAAGGCGGGTCTTGCCAAGCTCATAGGACTTGCTGGTGAGACCAATGTTCAGGGTGAAGAACAAAAGAAATTGGATGTCCTTTCCAATGAAGTATTCATCAAGGCTTTGATAAGCAGTGGGCGAACATGCATCTTGGTATCAGAAGAAGATGAGGAAGCAACATTTGTGGAACCCTCTAAACGTGGAAAGTATTGTGTTGTTTTTGATCCTCTGGATGGTTCCTCTAACATTGATTGCGGTGTTTCCATCGGCACAATTTTTGGGATCTATATGGTGAAAGATCATGAACCCACTATAGAAGATGTCATGCAACCAGGGAAGAACATGTTGGCAGCTGGATACTGCATGTATGGGAGCTCTTGCACGCTTGTGTTAAGCACTGGATCTGGTGTTAATGGATTCACCCTTGATCCATCTCTTGGAGAGTTCATTCTTACTCACCCTGACATTAAAATCCCAAAAAAGGGCAAGATCTATTCAGTGAATGAAGGAAATGCTAAAAACTGGGACGGTCCTACTGCCAAGTATGTGCAGAAATGCAAATTTCCAAAAGATGGTTCATCTCCGAAGTCTCTAAGATATATTGGGAGTATGGTAGCTGATGTCCATCGTACATTGCTTTATGGAGGAATCTTTTTGTACCCTGGTGATAAAAAGAGTCCTAATGGAAAACTCCGCGTTCTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAGGCAGGAGGCCAGGCTTTCACTGGCAAGATCCGGGCACTTGACTTGGTTCCAAAGAAGCTGCATGAGCGATCTCCCATATTCCTCGGTAGCTATGATGATGTTGAGGAAGTCAAAGGACTTTATGCTGCTGAGGCTGAGGCCCAATAG 1023 0.4516 MDHSADAQRTDLMTITRFVLNEQSKHPESRGDFTILLNHIVLGCKFVCSAVSKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALISSGRTCILVSEEDEEATFVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMVKDHEPTIEDVMQPGKNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVQKCKFPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKIRALDLVPKKLHERSPIFLGSYDDVEEVKGLYAAEAEAQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1195 340 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 204 333 IPR044015 -
Lele47g1195 340 PRINTS Fructose-1,6-bisphosphatase signature 309 334 IPR028343 GO:0042132
Lele47g1195 340 PRINTS Fructose-1,6-bisphosphatase signature 211 238 IPR028343 GO:0042132
Lele47g1195 340 PRINTS Fructose-1,6-bisphosphatase signature 185 208 IPR028343 GO:0042132
Lele47g1195 340 PRINTS Fructose-1,6-bisphosphatase signature 154 177 IPR028343 GO:0042132
Lele47g1195 340 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Lele47g1195 340 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Lele47g1195 340 Gene3D - 203 340 - -
Lele47g1195 340 FunFam Fructose-1,6-bisphosphatase class 1 203 336 - -
Lele47g1195 340 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Lele47g1195 340 CDD FBPase 20 333 IPR000146 GO:0005975|GO:0016791
Lele47g1195 340 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 200 IPR033391 -
Lele47g1195 340 PIRSF FBPtase 9 338 IPR028343 GO:0042132
Lele47g1195 340 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 334 IPR000146 GO:0005975|GO:0016791
Lele47g1195 340 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 335 IPR000146 GO:0005975|GO:0016791
Lele47g1195 340 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 202 - -
Lele47g1195 340 ProSitePatterns Fructose-1-6-bisphosphatase active site. 275 287 IPR020548 GO:0005975|GO:0042578
Lele47g1195 340 Gene3D - 4 202 - -
Lele47g1195 340 SUPERFAMILY Carbohydrate phosphatase 8 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1195 Lele-ChrLele47 17418636 17422384 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1195 47 17418636 17422384 Lele47g1195 47 17418636 17422384 ECH
Lele45g0105 45 971049 974367 Lele47g1195 47 17418636 17422384 hybridization
Lele46g0131 46 745433 748987 Lele47g1195 47 17418636 17422384 hybridization