Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1046 ATGGCCGGGAAAGCTGAACCCCTGAACGGGACTGCAAAATCTGGATCGAACCAGAGTGGTCCAGCAGCAATGCAGGCGTCGTCATTGAAGGCCGATCTGTCGAATATCCTTTCTTTGAAGAGCTTTAAGCTGAAAACCAAGCAGCAGGAGCTGCTGATCCGGGTTTCCATCCTATTGCTCGTCTATGTCTTGGCTTTCATCACTCGGCTCTTCAGTGTTCTGCGTTACGAGTCCATGATCCATGAGTTCGATCCTTACTTTAATTACCGGACCACACTTTTCTTGACTGAGAAAGGTTTCTATGAGTTCTGGAACTGGTTTGATTCTGAGAGTTGGTATCCTCTGGGTCGAATCATTGGAGGCACTCTCTACCCGGGTCTCATGGTCACTGCCGCTTTAATTTACTGGGGTTTGCGATTTCTTAGGTTTGCGGTTCACATCCGTGAGGTCTGTGTGTTAACAGCACCGTTTTTCGCATCGAACACTACCTTGGTTGCTTATTTCTTTGGTAAAGAGATTTGGGATTCGGGTGCTGGTCTTGTTGCTGCGGCATTGATTGCTATTTGTCCTGGGTACATTTCTAGGTCGGTGGCTGGATCATACGATAATGAGGGTGTTGCCATTTTCGCCTTGTTGTTGACATTTTACTTGTTCGTGAAGGCGGTGAATACAGGGTCGCTTGCATGGTCTTTAGCTTCCGCTTTTGGGTACTTCTACATGGTTTCTGCTTGGGGTGGTTACGTGTTTATCATTAATCTGATCCCACTATATGTGCTAGTTCTTTTAATCACTGGAAGGTATTCCATGAGACTGTATGTTGCTTATAACTGCATGTATATTTTGGGAATGTTGCTTGCAATGCAAATTCGATTTGTTGGATTTCAGCACGTGCAATCTGGAGAGCATATGGCTGCTATGGGCGTGTTCTTCTTGATTCAGGTATTTTACTTCTTGGATTGGGTGAGGCATTCTCTTGCTGATGCAAAATTGTTTGAGGCCTTTTTGAGGATCACTGTAACTACTGCTGTTAGTGTTGGTGTCATTGCTTTGGGTGTAGGCACAGCTTCTGGTTATATTTCTCCATGGACAGGAAGGTTCTACTCCTTGCTTGATCCAACCTACGCTAAGGATCATATTCCAATCATTGCATCTGTCTCTGAGCATCAGCCAACTGCTTGGTCATCTTTTATGTTTGATTTCCACATCCTGCTGTTTTTCTTTCCTGCTGGGCTCTACTTTTGCTTCAAGCGGCTGTCAGATGCAACAATTTTCATAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGCGTGATGGTTCGATTAATTCTTGTTGCTACACCTGCAGTATGCCTTATTAGTGCTATTGCAGTTTCTGCCACTGTGAAGAATTTGGCTCAACTGGTTAGGGCCAAAAGCAAAGCTGTTCAGAGTGGTTCTAGCAAAGGAACTAGTACTGTAAAAGGTTCTTCCAAGGGTTTGGTTGATCACTCCCAGCCTTTCCAAAGAAACGGTGCCTTTGTGTTACTTCTCGGTGCCTTCTATCTGCTCAGCAGATATGCTACTCACTGCACTTGGGTCACATCAGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGGGCCCATGGTAACAGGGTCATATTTGATGATTACCGTGAAGCATACTTTTGGCTCCGTCAGAATACTCCCCAAGATGCTAAGGTGATGTCTTGGTGGGATTATGGTTACCAAATCACTGCCATGGGAAATAGAACAGTCATTGTTGACAACAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCTTCTTACGAAGATGAGGCTTATGAGATAATGAAATCACTTGATGTGGATTATGTTTTAGTTGTCTTTGGTGGTGTTACTGGCTATTCTTCTGATGATATAAATAAATTTCTGTGGATGGTGAGGATTGGTGGTGGTGTTTTCCCTGTAATAAAGGAACCTGATTACCTTGTCAATGGAGAGTATCGTGTAGATAAAGGGGCAGCCCCCAAGATGTTGAACTGTCTAATGTACAAGCTGTGTTATTATCGCTTTGGGGAGCTGACAACAGAATATGGCAAACCACCTGGGTATGACCGTGCAAGAGGAGTTGAAATTGGGAACAAAGACATAAAGCTGGAGTATTTGGAAGAGGCATTCACTACACAGAATTGGATAGTTCGTATTTATAAAGTAAAACCACCTAAGAACAGGTGGTAA 2244 0.4403 MAGKAEPLNGTAKSGSNQSGPAAMQASSLKADLSNILSLKSFKLKTKQQELLIRVSILLLVYVLAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAALIYWGLRFLRFAVHIREVCVLTAPFFASNTTLVAYFFGKEIWDSGAGLVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLIPLYVLVLLITGRYSMRLYVAYNCMYILGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLIQVFYFLDWVRHSLADAKLFEAFLRITVTTAVSVGVIALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFFFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLAQLVRAKSKAVQSGSSKGTSTVKGSSKGLVDHSQPFQRNGAFVLLLGAFYLLSRYATHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPQDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMKSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLCYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1046 747 Pfam Oligosaccharyl transferase STT3 subunit 53 533 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lele47g1046 747 Gene3D - 550 699 - -
Lele47g1046 747 MobiDBLite consensus disorder prediction 1 22 - -
Lele47g1046 747 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 549 701 - -
Lele47g1046 747 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 39 746 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1046 Lele-ChrLele47 16255460 16259461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1046 1 746 Miscellaneous Gene Families AT1G34130 86.059 0.0 1305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1046 47 16255460 16259461 Lele47g1046 47 16255460 16259461 ECH
Lele45g0348 45 2762837 2766835 Lele47g1046 47 16255460 16259461 hybridization
Lele46g0377 46 2520641 2524451 Lele47g1046 47 16255460 16259461 hybridization