Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0162 ATGGCTTTCGCGATGCCCGACGAGGCGTGGCATGATTTAAAGGTTGGGTTGCAACTGCTCCTCTCCCCTCTTGGTTCTAAAATTGTTGTCCGGACAGCATGCTGTTCTGTGGGGCTTGCGCTTCCTGTTTACTCTACTTTTAAAGCTATTGAGAACAAAGACCAAAATGAACAACAAAGGTGGCTGACATACTGGGCAGCTTATGGATCTTTTAGCATAGTAGAAATGTATGCAGAAAAAGTACTTTCCTGGATCCCACTTTATTACCATATGAAATTTGCATTTCTTGTTTGGCTTCAGCTTCCCACTGTCAATGGAGCAAAACAACTGTATGAGAGTCACGTGCGTCCATTCTTGCTGAAGCATCAAGCTAGAATGGATCAGGTTACGGAATTTCTTTATGGTGAAATGAGTAAATTCATTAGCGCACACCAAGCTGAATTTCTGTTTGCAAGATCACTTGTAGCAAAAGTTGTAGTGACAGCTAATGAAATGATTAGGTCTGCCATTCGGCCGGTTGAAAGGCAAGAAAATCAAGGCCCAAAGAGGGAGATTGAGAATCCAGAATCAGAAGACAATTGA 582 0.4261 MAFAMPDEAWHDLKVGLQLLLSPLGSKIVVRTACCSVGLALPVYSTFKAIENKDQNEQQRWLTYWAAYGSFSIVEMYAEKVLSWIPLYYHMKFAFLVWLQLPTVNGAKQLYESHVRPFLLKHQARMDQVTEFLYGEMSKFISAHQAEFLFARSLVAKVVVTANEMIRSAIRPVERQENQGPKREIENPESEDN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0162 193 MobiDBLite consensus disorder prediction 176 193 - -
Lele47g0162 193 Pfam TB2/DP1, HVA22 family 42 118 IPR004345 -
Lele47g0162 193 PANTHER HVA22-LIKE PROTEINS 30 144 IPR004345 -
Lele47g0162 193 MobiDBLite consensus disorder prediction 172 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0162 Lele-ChrLele47 1177340 1180457 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1247 45 22440544 22443759 Lele47g0162 47 1177340 1180457 hybridization
Lele46g1337 46 20460693 20463565 Lele47g0162 47 1177340 1180457 hybridization