Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0154 ATGGCGCAGCCGCTCGTGAAGAAGGACGACGACCGGGACGATGAAGGTGGTTCCTCCCTCATTTATCCCTCACTCCGCATTGTACACCGAAGAACAGCCACTATTTGTTCCCACTATTCGGAATTCGACCTGTCTTCTATGTTTTTGTGTTTAAAATTCGCTGCTTTAGGTTGCCTCAACTGGATCACTCTTCTCGCTTCTAGATCTATGTTTATTTTGCATTTTAGAATTATGAATGCAGCAGCCGAGTATTCACCCTTTCTGGGAATTGAGAAGGGTGCTGTCCTTCAAGAAGCCAGGGTTTTCAATGACCCACAACTTGATGCCAGGAGATGTTCACAGGTTATAATTGTGACAAGCTCTCTCATGAAGGACATGAATAGCAAAACTGATATGTACAGGGCAAATGCTATTCGTGTACTTTGTCGTATTACAGATGGAACCCTCCTTGCCCAAATTGAGAGGTATTTGAAACAAGCAATTGTAGATAAGAATCCTGTTGTTGCAAGTGCAGCCCTAGTTAGTGGCATTCATCTACTCCAGACAAATCCTGAGATTGTGAAAAGGTGGAGCAATGAGGTTCAAGAAGCTGTTCAATCAAGAGCAGCTCTTGTGCAGTTTCATGCACTTGCTTTGCTACATCAGATAAGGCAGAATGATCGCCTAGCTGTTAGCAAGTTGGTTACCAGCTTGACAAGGGGAACTGTTCGCTCACCTTTGGCCCAATGCCTTTTGATCCGTTATACCAGTCAGGTTATTCGTGAGTCCAGCAATAATACCCAAACAGGGGACCGTCCATTTTATGATTTTCTTGAGAGCTGCCTTCGCCACAAATCAGAGATGGTGATTTTTGAAGCAGCCAGAGCAATTACTGAGTTCAGTGGTGTAACAAATCGGGAATTAACTCCAGCAATTACTGTTCTTCAGCTCTTCTTAAGTTCTTCTAAGCCTGTCTTGAGATTTGCTGCTGTGCGCACATTGAACAAGCTGATGTTCTTGCCAGTTGCGCTAAGCAATGCTCAGTTTGGTTATCAGGTCGCCCCCTTTGTAGGTAGCTCTTTTTATGTGGGGGTGGCAATGACACATCCCATGGCTGTCACCAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAAAACAGAAGTATTGCCACACTTGCAATAACTACGCTGTTAAAGACAGGAAATGAAAACAGTGTGGACCGTCTTATGAAGCAGATTACAAATTTTATGTCAGATATCACTGATGAGTTCAAAGTTGTTGTTGTTGATGCCATAAGATCATTGTGTTTGAAGTTTCCCTTGAAATATCGATCTCTGATGAACTTCTTGAGTAACATTCTTCGGGAAGAAGGTGGATTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATAAGAGATATCCCAGATGCAAAGGAGAGTGGGTTGCTTCATCTTTGTGAATTCATTGAAGATTGTGAATTCACCTATTTGTCCACACAGATACTGCACTTCCTGGGAGTTGAAGGACCGAAAACATCTGACCCCAGCAAATATATACGTTACATATATAATAGAGTACATCTTGAGAATGCAACTGTCAGGGCCAGTGCTGTTAGCACTTTGGCAAAGTTTGGTGCCGCAGTAGAATCATTAAAGCCCCGGATATTTGTTCTGCTGAGGCGATGTCTTTTTGACAGTGATGATGAGGTTCGTGACAGGGCAACACTTTATCTTGATACAGTTGGAGGAGATGGTACAGTTTTTGAGACTGATAAGGATACCAAGGATTTCCTCTTTGGTTATTTTAATGTCCCCCTCGTGAATCTAGAAAATAGTTTGAAAAATTATGAGCCTTCGGAAGAACCTTTTGACATCAACTCTGTGCCTAGGGAGGTTAAGTCTCAGCCACTTGCAGAGAAAAAGGCACCAGGCAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGTCCTCCATCCACTGCAGATGGATATGAAAGGCTCCTGGCCTCCATTCCTGAGTTTGCAAACTTTGGGAAGCTCTTCAAGTCCTCACCACCTGTGGAACTTACTGAAGCAGAGACAGAATATGCAGTCAATGTTGTTAAGCACATTTTTGAAAGGCACGTTGTGTTCCAGTACAACTGCACAAACACTATACCAGAGCAATTACTGGAAAATGTTACTGTAATTGTAGATGCCTCAGATGCTGAGCAATTCTCTGAGGTTTTCTCCAAGCCTCTCAGATCTCTTCCTTATGACTCACCTGGGCAGACATTTGTGGCTTTTGAGAAGCCAGAAGGATTGCCTACGGTTGGAAAATTTTCCAACATTCTGAAATTCATCGTTAAAGAGGTTGACCCGTCCATTGGTGAGGCAGAAGATGATGGTGTGGAAGATGAATACCAGCTCGAGGACTTGGATATTGCTGCTGCTGATTACATGTTGAAAGTGGGAGTGTCTAATTTTAGAAATGCGTGGGAAAACATGGATCCTGACGCTGAGCGAGTGGATGAATATGGGCTTGGCCCAAGAGAGAGCTTGGCTGAAGCTGTAAAAACTGTCATCAATCTTCTTGGCATGCAGCCCTGTGAGGGCACAGAGACTGTACCACCCAATGCAAGGTCTCACACCTGTCTATTATCTGGTGTATTTATAGGGAATGTAAAGGTGCTTGTGCGCTTGTCCTTTGGACTCGATGGTCCAAAGGATGTTGCGATGAAACTGGCGGTTAGATCAGAGGATGAATGTGTCAGTGACGCCATTCATGAGCTTGTGGCTAGCGGCTAG 2781 0.4376 MAQPLVKKDDDRDDEGGSSLIYPSLRIVHRRTATICSHYSEFDLSSMFLCLKFAALGCLNWITLLASRSMFILHFRIMNAAAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIRESSNNTQTGDRPFYDFLESCLRHKSEMVIFEAARAITEFSGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKLMFLPVALSNAQFGYQVAPFVGSSFYVGVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNENSVDRLMKQITNFMSDITDEFKVVVVDAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTLAKFGAAVESLKPRIFVLLRRCLFDSDDEVRDRATLYLDTVGGDGTVFETDKDTKDFLFGYFNVPLVNLENSLKNYEPSEEPFDINSVPREVKSQPLAEKKAPGKKPTGLGAPPSGPPSTADGYERLLASIPEFANFGKLFKSSPPVELTEAETEYAVNVVKHIFERHVVFQYNCTNTIPEQLLENVTVIVDASDAEQFSEVFSKPLRSLPYDSPGQTFVAFEKPEGLPTVGKFSNILKFIVKEVDPSIGEAEDDGVEDEYQLEDLDIAAADYMLKVGVSNFRNAWENMDPDAERVDEYGLGPRESLAEAVKTVINLLGMQPCEGTETVPPNARSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLAVRSEDECVSDAIHELVASG 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0154 926 SUPERFAMILY ARM repeat 114 579 IPR016024 -
Lele47g0154 926 SUPERFAMILY Clathrin adaptor appendage domain 657 810 IPR013041 -
Lele47g0154 926 FunFam Coatomer subunit gamma 654 807 - -
Lele47g0154 926 Gene3D Coatomer, gamma subunit, appendage domain 656 807 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lele47g0154 926 Gene3D - 808 924 IPR012295 -
Lele47g0154 926 MobiDBLite consensus disorder prediction 616 661 - -
Lele47g0154 926 Gene3D - 105 599 IPR011989 -
Lele47g0154 926 FunFam Coatomer subunit gamma 372 580 - -
Lele47g0154 926 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 811 923 IPR009028 GO:0006886|GO:0016192|GO:0030117
Lele47g0154 926 PANTHER COATOMER SUBUNIT GAMMA 1 116 IPR017106 -
Lele47g0154 926 FunFam Coatomer subunit gamma 808 924 - -
Lele47g0154 926 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 809 922 IPR032154 -
Lele47g0154 926 Pfam Coatomer gamma subunit appendage platform subdomain 662 806 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Lele47g0154 926 PIRSF Gamma-COP 355 924 IPR017106 -
Lele47g0154 926 PIRSF Gamma-COP 113 342 IPR017106 -
Lele47g0154 926 PIRSF Gamma-COP 78 116 IPR017106 -
Lele47g0154 926 Pfam Adaptin N terminal region 114 577 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0154 Lele-ChrLele47 1101970 1109373 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1256 45 22526641 22534023 Lele47g0154 47 1101970 1109373 hybridization
Lele46g1348 46 20545556 20552946 Lele47g0154 47 1101970 1109373 hybridization