Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0353 ATGGCTTCCAGAGGAGCGAACATGGTGCTATCAAGGGCGAATAGGATAAAGACGAAGTTACAGTCAGCACTGGAAGCCACAGTTTTGGAGGTAGAAGACGTGTCGTACCAGCATGCGGGTCATGCGGCCATGAAAGGAACCTCCGGCCAGGAGACTCATTTCAACCTGAAGATCGTCTCGCCCAAATTCGACGGCCTGAGTCTCGTGAAACGGCACCGTATGGTCTACGATTTGCTCGCCAATGAGCTTCAATCTGGATTGCACGCCCTCTCTATTGTCGCCAAAACGCCTCAGGAAACCTCTACCAAATAA 312 0.516 MASRGANMVLSRANRIKTKLQSALEATVLEVEDVSYQHAGHAAMKGTSGQETHFNLKIVSPKFDGLSLVKRHRMVYDLLANELQSGLHALSIVAKTPQETSTK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0353 103 Pfam BolA-like protein 20 99 IPR002634 -
Lele45g0353 103 FunFam SufE-like protein, chloroplastic 10 102 - -
Lele45g0353 103 PIRSF BolA 1 103 IPR002634 -
Lele45g0353 103 SUPERFAMILY BolA-like 11 101 IPR036065 -
Lele45g0353 103 Gene3D - 10 103 IPR036065 -
Lele45g0353 103 PANTHER - 9 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0353 Lele-ChrLele45 2797941 2798252 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0353 45 2797941 2798252 Lele45g0353 45 2797941 2798252 ECH
Lele45g0353 45 2797941 2798252 Lele47g1043 47 16238240 16238551 hybridization
Lele45g0353 45 2797941 2798252 Lele48g1106 48 15794056 15795908 hybridization