Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1247 ATGACAAAAGTCCACCCAAACTCGGCTGCTTCTGCTTCTGCGGCAGCCGCTGCCACCTCCTCCGATCATGACAAGACATCCTCCATGGGCGGAAAAGTTCCGGTGGTGCTCACAGTTTGGAAGAAGTCTCTTCTGTTAAACTGCAACGGGTTCACGGTGTTCGATTGCGAAGGCAATCTTGCTTTTAGGGTGGATAACTACTCCGCCCGAAGTAAGGATGAGATCCTCCTCATGGATGCGGCCGGAACTCCTCTCCTCACCATCCGCCGCAAGAGGCTGGGTTTGGCAGACAAATGGCTAGTGTTCGAAGGAGAGAGCGGAGTGAAACCTCGATACTCGGCAAAGAAGCAGGTGAATCTGCTGAACGCAAAGTGTTTGGCTCAGGTGATGAGCTTGTCGGGAGGTGAGAGCAAGTATGAGATAGGGGGATCATACACGCAACGCTGCTGCGGGGTGTACGACGACAAAAGGAGAAGGGTGGCGGAGATCAAGAAGAAGGAAGCTGCCGTAGGAGGAGTGGCTTTTGGGGCTGACGTCTTCCGTCTCATCGTTCACCCCGATCTCGACCCCGCCCCCGCCATGGCTTTCGTCATCCTTCTTGATCAGATGTTCGGTTCTTCCTCTTCCTAG 630 0.5444 MTKVHPNSAASASAAAAATSSDHDKTSSMGGKVPVVLTVWKKSLLLNCNGFTVFDCEGNLAFRVDNYSARSKDEILLMDAAGTPLLTIRRKRLGLADKWLVFEGESGVKPRYSAKKQVNLLNAKCLAQVMSLSGGESKYEIGGSYTQRCCGVYDDKRRRVAEIKKKEAAVGGVAFGADVFRLIVHPDLDPAPAMAFVILLDQMFGSSSS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1247 209 MobiDBLite consensus disorder prediction 1 29 - -
Lele40g1247 209 PANTHER - 36 205 IPR007612 -
Lele40g1247 209 Pfam LURP-one-related 32 198 IPR007612 -
Lele40g1247 209 MobiDBLite consensus disorder prediction 1 27 - -
Lele40g1247 209 SUPERFAMILY Tubby C-terminal domain-like 33 204 IPR025659 -
Lele40g1247 209 Gene3D - 31 207 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1247 Lele-ChrLele40 22216037 22216755 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1422 37 22902987 22903748 Lele40g1247 40 22216037 22216755 hybridization
Lele38g1299 38 23721065 23721783 Lele40g1247 40 22216037 22216755 hybridization