Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1242 ATGGCGGCCGTGGCTCAGTTGTGTTTTTCTCCTCTCTCTAGGCATTACCGTTCGGTTTCGGACAGTCGCGCACATAATACTCGTCAAGTCTTTTCTTTCGGGTCATCCCTTAACATTCAAGATCGTTCTTTATATCTCATCAATAGTTCAAAGGATTTTTATCTTAATTTTCCGGGAAAATTGCGCCTCTCATACGCTGGTGGTGACGGCAGCAATGGGACTGGACGTGGCGGCGGAAGTGGCGGCGGCGGCGATAGCGGAAACTTTGATGACTCGTCACCCTCATTTGAGGGGTTTGGGATCCTGGGTCTGTTTCTAAATGGATGGAGATCCAGAGTTGCAGCAGATCCGCAATTCCCTTTCAAGGTTCTGATGGAAGAGTTGGTGGGAGTGAGCGCCTGTGTTCTTGGCGATATGGCTTCACGGCCTAATTTCGGATTGAATGAGCTCGATTTCGTCTTCTCAACACTTGTGGTCGGATCCATCATGAATTTCACACTCATGTATCTGCTAGCGCCCACAATGTCATCCTCTTCCTCGAGCCTACCAGCGATCTTCGCAAGTTGCCCTAAGAGCCACATGTTCGAACCGGGGCCTTACAGCATTGTGAATCGATTTGGCACTCTGGTGTACAAAGGAACTGTGTTTGCTGCTGTGGGGTTCGTTGCTGGACTTGCTGGGACTGCAATTTCAAATGGGTTGATCGCGATGAGGAAGAACATGGACCCAAGTTTTGAGACACCCAACAAAGCTCCACCAACACTATTGAATGCGCTGACATGGGCAATTCACATGGGCGTGAGCAGCAATTTCAGATACCAAACTCTGAATGGGATTGAGTTCATGTTGGAAAGGGGGCTTTCTGCATTTGCATTCAAGTCGTCAGTAATAGTGCTGAGGTGCGTGAACAATGTTCTTGGAGGTATGTCGTTTGTTGTGTTGGCGAGGATGACAGGGTCACAGAGTGTTGCTGCTGAGAAGCCTGTGGTTGCAGAGAAGGAGAGGTTGATGGATACGAAAAGGGAAGGGCAAGAGGATTTGCAGCGCAATCAGTCGACATCAAAGTGA 1068 0.4897 MAAVAQLCFSPLSRHYRSVSDSRAHNTRQVFSFGSSLNIQDRSLYLINSSKDFYLNFPGKLRLSYAGGDGSNGTGRGGGSGGGGDSGNFDDSSPSFEGFGILGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTMSSSSSSLPAIFASCPKSHMFEPGPYSIVNRFGTLVYKGTVFAAVGFVAGLAGTAISNGLIAMRKNMDPSFETPNKAPPTLLNALTWAIHMGVSSNFRYQTLNGIEFMLERGLSAFAFKSSVIVLRCVNNVLGGMSFVVLARMTGSQSVAAEKPVVAEKERLMDTKREGQEDLQRNQSTSK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1242 355 MobiDBLite consensus disorder prediction 334 348 - -
Lele40g1242 355 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 102 342 - -
Lele40g1242 355 MobiDBLite consensus disorder prediction 334 355 - -
Lele40g1242 355 Pfam Protein RETICULATA-related 112 279 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1242 Lele-ChrLele40 22168459 22169526 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1418 37 22871723 22872790 Lele40g1242 40 22168459 22169526 hybridization
Lele38g1294 38 23667969 23669042 Lele40g1242 40 22168459 22169526 hybridization