Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1221 ATGGAAGCAGACAACTCCGATTTCGGTTCTGAAACCGTCCCAGACGCGGGTCTCCATGAGCCGGCTTCCGTTAAGGAGGAGCGCATTTTGAGAGTGCAGATTGATACTTCGGCTCCGTTTGAATCCGTGAAGGAGGCCGTCACCCGATTTGAGGGTCTTGGCTTCTGCAAATTCCTCCACGATAATCTGTCGACTCTTGAGCAGCAGGAAACACCAGAGCATGACACTGGAAAGCTAGAGGAGGAGGCAACAGTATTGGAGAAAGAACTTATCCTGAAAGAAAAGGAAACTCTGGATGTCTTAAAAGAACTGGAAAGCACCAAAAGGCTCGTTGAGGATTTGAAGTCAAAGCTGCAAAAGGAAGAATGTGAAGCCTACTTGAATAACAAAGAAGAAGATAAGGAGAACCAAGTGAATCAATTGGACACGTTGAACCAAGGCCTTAGTCCCTACCCTTCATCTAAACCAGGCCTCATATTAATCGAGCTGAAGCAGGCCAAGTTGAACTTAACCAAAACTACAAATGATATAGCTGATGTGCGGGCCTCTGTTGTATGGCTCAATAAGAAGCTAGAGAAGGAAAGAGCCTCACTCGAGAGAACTCGTGAGAGGTTAACTAACAATTCTTCAAAATTATCTTCTCTTGAGGAAGAACTGAGCCAGACAAGACTAAGACTTCAAGTCGCAAAAGATGATCCCTCTGATATCACAAAAGAGCTTAACAGGTTGTGTTCTGAGGCAGAGCATTTCAAAAGGATGGGAGAAGCTGCAAAATCGGAAGTCTTGAGAACCATGTCTGAGATTGAACGGACAAAAAGTATGATAAGGACGGCTGAATTAAGATTGGTTGCTGCTAGGAAGATGAAGGAAGCTGCTAGAGCTGCAGAATCAGCTTCCTTAGCAGAAATTAACGTACTGTCTAATAATCTCAAGGGTTCATCTCAAGTGGTAACTCTTTCATTTGAGGAGTACAATGCTCTAACGTCTAAAGCTCTAGAAGCAGAGGAAAACTCCAAGAGAAAAATTACAGACGCCATGCTTCAAGTTGATGAAGCAAATTTATCGAAAACGGAGATCCTGAAAAGGGTGGAGGAGGCCACAAAAGAAGTTCAGGCTTGCAAGAAAGATTTGGAAGAAGCCATGGAAAGAGTAGGGGCTGCAAATAGAGGGAATCTAGCGGTTGCAGAGGCCTTAAGGAAGGGTCACAAAAGAAGGCCTTCTTCTGTACGTAACTCAGCCAAGTTAAATTCTAACCCTTCATCTCATCATCGAAGAGATTCTCCGTTAGTTGGCGCAAATGGACTGGAAGTGGAAGATGACGAAGCCAAACCCGATGTTCCAAAGACAGTTTTATCAATAGGAGAAATATTGAGCAGGAAGCTGCTTCTTTCACAAGAGTTTGAAGCAGGATCGCTGGGACACATGCTTGGAAGACAAAAGGATGATTCATACTTCTGTAAGCAGTTTTGTGGAAAGAGAAAGAAATTCGGGTTTGCTCGATTGTCACATCTTTTGGGAAATAAACAGAAGAAAAAGAAGCCGACTCTGAATTTGAGTACCGCAAAATCAGACTATTCTGAACTAGCCAAGAAACAAGATGCTTGTGCAATTTGTGAGGAGTATATTACCAAGGCTCTTGATTTCCTGACTAAAAACAAGACTCAGGATGAGATCATTGATATCCTTTTCCATACATGTCACAAGCTGCACCCTTTAGGGCAGCAGTGCTTAAATTTGTTGGACCAGGATGCTGTTTCAGAATTATTGGTTAAGTTGAAAGATCCTTACACTGAGCTAGATATAATTGAGAAATTATTGAAGGGGTGCAATTCCATGGAGAAGTATGCGCAAAAGTGCAAGAGGCTGGTTTTCGTGTATGGACCTGTGATGCTTGTCAAAGCAGAGAAGTTCCTTGAAAGAACAGATATATGCACTACATTACATGCTTGCAAAGCTTCCACAATTAATATGGAAGCCAAAGACATGAAAGAAACTCTTTTAATTTGCTTGCCGACTCTTAATTATGGAAGTAAAAGAAGTCTTCTTGGAAAGAGAGATACTACCATCACCCTGTAA 2076 0.4239 MEADNSDFGSETVPDAGLHEPASVKEERILRVQIDTSAPFESVKEAVTRFEGLGFCKFLHDNLSTLEQQETPEHDTGKLEEEATVLEKELILKEKETLDVLKELESTKRLVEDLKSKLQKEECEAYLNNKEEDKENQVNQLDTLNQGLSPYPSSKPGLILIELKQAKLNLTKTTNDIADVRASVVWLNKKLEKERASLERTRERLTNNSSKLSSLEEELSQTRLRLQVAKDDPSDITKELNRLCSEAEHFKRMGEAAKSEVLRTMSEIERTKSMIRTAELRLVAARKMKEAARAAESASLAEINVLSNNLKGSSQVVTLSFEEYNALTSKALEAEENSKRKITDAMLQVDEANLSKTEILKRVEEATKEVQACKKDLEEAMERVGAANRGNLAVAEALRKGHKRRPSSVRNSAKLNSNPSSHHRRDSPLVGANGLEVEDDEAKPDVPKTVLSIGEILSRKLLLSQEFEAGSLGHMLGRQKDDSYFCKQFCGKRKKFGFARLSHLLGNKQKKKKPTLNLSTAKSDYSELAKKQDACAICEEYITKALDFLTKNKTQDEIIDILFHTCHKLHPLGQQCLNLLDQDAVSELLVKLKDPYTELDIIEKLLKGCNSMEKYAQKCKRLVFVYGPVMLVKAEKFLERTDICTTLHACKASTINMEAKDMKETLLICLPTLNYGSKRSLLGKRDTTITL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1221 691 ProSiteProfiles Saposin B type domain profile. 531 654 IPR008139 -
Lele40g1221 691 MobiDBLite consensus disorder prediction 410 424 - -
Lele40g1221 691 SMART sapb_4 582 650 IPR008139 -
Lele40g1221 691 Gene3D - 584 653 - -
Lele40g1221 691 Gene3D - 531 583 - -
Lele40g1221 691 Coils Coil 101 147 - -
Lele40g1221 691 Gene3D - 159 319 - -
Lele40g1221 691 Coils Coil 188 232 - -
Lele40g1221 691 Pfam Saposin-like type B, region 1 533 569 IPR007856 GO:0006629
Lele40g1221 691 MobiDBLite consensus disorder prediction 1 24 - -
Lele40g1221 691 Pfam Weak chloroplast movement under blue light 162 400 IPR008545 -
Lele40g1221 691 Pfam Weak chloroplast movement under blue light 32 130 IPR008545 -
Lele40g1221 691 Coils Coil 349 383 - -
Lele40g1221 691 SUPERFAMILY Saposin 584 652 IPR011001 -
Lele40g1221 691 MobiDBLite consensus disorder prediction 399 441 - -
Lele40g1221 691 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 33 124 - -
Lele40g1221 691 SUPERFAMILY Saposin 533 582 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1221 Lele-ChrLele40 22029320 22035457 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g1221 40 22029320 22035457 Lele40g1221 40 22029320 22035457 ECH