Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1212 ATGGCTTACCCACAGGCGCCCTATGTCTCCGCCTCCGCGCCGCCCAACCCGATCTCCGTGATCAGCCCCCAATACTGTGCTCCTTATCCGGTGGATCTAAGCATTGTAAAGAAGGTGATGTCCATCTCCGACGGCAACTTTGTGGTCGCTGACGTGCAAGGCAACGTCGTCTTCAAAGTTAAAGGCTCTGTCTTAACCCTCCGTGACCGCCGCGTCTTGATCGACCCCGCCGGCAACCCCATCGTGACCCTCCGCCGCAAGATAATGACGGCGCATGACAGATGGCAAGCTTTTATGGGGGAAAGCACAGAAGAAAAGGATCTGATATTCCAACTGAAGAGGTCCTCCTTAATCCAATTTAAAACCAAATTAGATGTCTTCTTAGCTCATAATACCAAAGAAGACGTCTGCGACTTCAAGGTCAAAGGTAGTTGGCTCGAACGTTCTTGTATCGTTTACGCCGGTGAGTCCGACACCATCGTCGCCCAGATGCATAAGAAACACACGGTTCAGAGCATATTAATAGGGAAAGACAATTTCATGGTGACTGTGTACCCCTGCGTGGATTATGCATTCATAGTGGCTCTCATCGTGATTCTCGACGAAATAAATGACGACGAAAGGGAAGACTAG 633 0.5008 MAYPQAPYVSASAPPNPISVISPQYCAPYPVDLSIVKKVMSISDGNFVVADVQGNVVFKVKGSVLTLRDRRVLIDPAGNPIVTLRRKIMTAHDRWQAFMGESTEEKDLIFQLKRSSLIQFKTKLDVFLAHNTKEDVCDFKVKGSWLERSCIVYAGESDTIVAQMHKKHTVQSILIGKDNFMVTVYPCVDYAFIVALIVILDEINDDERED 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1212 210 Pfam LURP-one-related 20 199 IPR007612 -
Lele40g1212 210 SUPERFAMILY Tubby C-terminal domain-like 19 204 IPR025659 -
Lele40g1212 210 Gene3D - 18 209 IPR038595 -
Lele40g1212 210 PANTHER - 31 204 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1212 Lele-ChrLele40 21958261 21959761 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1267 38 23457059 23458562 Lele40g1212 40 21958261 21959761 hybridization