Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1199 ATGGGGACAGGAAGGAAAACACAAATATTCTATGTCAACGGGACTCAATCTCTCATTCCGAATTCACCTGTCAGTTCTGTATGTGGCAGAAATTTGAAAAAAGACCAACTTGGTGGTGTAATATTTGGTTGCAAGAATGCTACCATAAAAGAATGTTTATCTAAACAGCTATTTGGCTTACCAGCCCAACACTTCTCCTATGTGAAGAATATTGAACCTGGGCTGCCTCTCTTTCTGTTCAACTATAATGATAGGAAGCTTCATGGAATCTTTGAGGCAGCTGGCAGGGGGCAAATGTCTATAGACCCTTATGGATGGACTGCTAATGGCTCAGAGAGAACACAGTATCCTGCACAGGTTCAAGTTTGTGTTCGGCTTCAATGCCAGCCACTGTCTGAAGATACATTCAGGCAAGTAATTGCTGACAATTACTACAATAGCTGTCACTTCTGGTTTGAGCTTGACCATGGACAAACTAGAAAGCTTACTTCTTTACTAGCATCTTCAGCAATTGGCCCGAGTACTTATATACCACAGAATACAATGATGTGGAGAACTGTATCTCAATCTCTTCCATCACATGAAACTTCAGTGGAAGATGAAGCATTTAAAAAACTAACATCAGAAGTAGATAATTCTACTCAATCAACTAGCAGATATCATTCTCCTGAAGGTGCTTCTTCCATGGATGCTGATAGGGATATCCCGCAATTGGATTCTCATGTGATATCAAAGGAAGCAGAACAGGATGAAAAAACCCTTATACTCATGAAACTAAAGGAATTGGCTTTGAATCGTGAAAGTCAAAACATTTCTTTGCCAGACAATGTGAAAGACACTCCTGATGTGAATAGCATGAACTCTGCTGAGAAGGGTTGTCTGGAAGCATTAACTGGTTTGGAGAAGAAGGAAGAGTGTCCTAGTCCTCCAGTTGAGTATCAGATCATCATTGCCCAGTTGATACAAGAGGTCAAAGAATTGACAGCCTTCAAGGAAACACAAACTCAGAAGTGCCATTCTCTAGAGCTGAAGCTGGTGGAGGCAGAATTGGAAATTAACCATCTAAAAGATCGCTGTACAATATTAGAATCTGCATGTAATCTTTCTCTGGAGTATGATGAAAAGACAGTCATTCAGTCTTCTGATCAGCAACATTTAGACCATAAAGAGTCATTGTATTTAATAGGAGGCTACGATGGAGAATCGTCCTTAGCATCTATGGATTTGTATTGCCCTTCCCTGAACATGATGAAATCTCTAAGGCCTATGAGCTCAGTTCGCTCTTATGCTTCAACTGTGCAGTTGAATGGGGAGGTTTATGTGTTTGGTGGTGGAAATGGTTGTATTTGGTATGACACAGCCGAGTCATACAGTCCAATTTTTGATAAGTGGACTCTGTGGCCATCTTTAAATCAGAAGAAAGGAAGCCTTGCTGGAGCTGGTTTAAGCAACAAAATATTTGCCATTGGTGGAGGCAATGGAATTGACTGTTATTCAGAGGTTGAGATTCTTGATTTAGACATAGGAAGGTGGATCTATATTCGTTCAATGCTTGAGAAGAGGTTTGCACCTGCTGCGGTGGAATCCAATGGTATTATTTACGTTACTGGTGGATTTGATGGGAATGACTATTTGCAGTCTGCTGAAAGATATGATCCTAGGGAACATCGTTGGACCAAAATAGCCAACATGAATACAAAGCGGGGCTGCCACTCATTGGTTGCGCTAAATGACAAGTTGTATGCTCTTGGTGGCTTTGATGGAGACGCAATGGTTCCAAGTGTTGAGGTCTTCGATCCCCGACTTGAGACATGGATGACGGGGGAGCCCATGAATCATCCTAGGGGGTATTCTGCTGCCGCAGTTGTCAGTGATTCAATTTATGTGATTGGGGGAGTCAAATTTGGCGAGAACATCTTAGATATTGTTGAGAATTATAAGGAAGGTCAGGGATGGCAAGAACTTGGCCCAACAGTCGTTGGCAAAAGTTTTCCTCATCAGGCAGAAGGAACTTATTCTAATAATTGTGTTTACAACAAGAATCACCCTTGGGATGTTAAGCGCTATAGAAACTAG 2076 0.4152 MGTGRKTQIFYVNGTQSLIPNSPVSSVCGRNLKKDQLGGVIFGCKNATIKECLSKQLFGLPAQHFSYVKNIEPGLPLFLFNYNDRKLHGIFEAAGRGQMSIDPYGWTANGSERTQYPAQVQVCVRLQCQPLSEDTFRQVIADNYYNSCHFWFELDHGQTRKLTSLLASSAIGPSTYIPQNTMMWRTVSQSLPSHETSVEDEAFKKLTSEVDNSTQSTSRYHSPEGASSMDADRDIPQLDSHVISKEAEQDEKTLILMKLKELALNRESQNISLPDNVKDTPDVNSMNSAEKGCLEALTGLEKKEECPSPPVEYQIIIAQLIQEVKELTAFKETQTQKCHSLELKLVEAELEINHLKDRCTILESACNLSLEYDEKTVIQSSDQQHLDHKESLYLIGGYDGESSLASMDLYCPSLNMMKSLRPMSSVRSYASTVQLNGEVYVFGGGNGCIWYDTAESYSPIFDKWTLWPSLNQKKGSLAGAGLSNKIFAIGGGNGIDCYSEVEILDLDIGRWIYIRSMLEKRFAPAAVESNGIIYVTGGFDGNDYLQSAERYDPREHRWTKIANMNTKRGCHSLVALNDKLYALGGFDGDAMVPSVEVFDPRLETWMTGEPMNHPRGYSAAAVVSDSIYVIGGVKFGENILDIVENYKEGQGWQELGPTVVGKSFPHQAEGTYSNNCVYNKNHPWDVKRYRN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1199 691 SUPERFAMILY Kelch motif 390 658 IPR015915 GO:0005515
Lele40g1199 691 SMART kelc_smart 579 625 IPR006652 GO:0005515
Lele40g1199 691 SMART kelc_smart 532 578 IPR006652 GO:0005515
Lele40g1199 691 SMART kelc_smart 626 672 IPR006652 GO:0005515
Lele40g1199 691 SMART kelc_smart 438 484 IPR006652 GO:0005515
Lele40g1199 691 SMART kelc_smart 485 531 IPR006652 GO:0005515
Lele40g1199 691 SMART kelc_smart 391 437 IPR006652 GO:0005515
Lele40g1199 691 Coils Coil 331 365 - -
Lele40g1199 691 MobiDBLite consensus disorder prediction 208 224 - -
Lele40g1199 691 Pfam Kelch motif 521 565 IPR006652 GO:0005515
Lele40g1199 691 Pfam Kelch motif 482 517 IPR006652 GO:0005515
Lele40g1199 691 Pfam Kelch motif 427 470 IPR006652 GO:0005515
Lele40g1199 691 Pfam Kelch motif 568 612 IPR006652 GO:0005515
Lele40g1199 691 Gene3D - 566 686 IPR037293 -
Lele40g1199 691 SMART dcd 35 168 IPR013989 -
Lele40g1199 691 Pfam Development and cell death domain 38 165 IPR013989 -
Lele40g1199 691 MobiDBLite consensus disorder prediction 207 234 - -
Lele40g1199 691 ProSiteProfiles DCD domain profile. 35 168 IPR013989 -
Lele40g1199 691 PANTHER - 26 663 IPR044832 GO:0034976
Lele40g1199 691 Gene3D - 379 565 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1199 Lele-ChrLele40 21867889 21872806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1199 533 639 EF-hand Containing Proteins AT4G39560 29.915 2.06e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1381 37 22608915 22609495 Lele40g1199 40 21867889 21872806 hybridization
Lele38g1257 38 23375159 23382521 Lele40g1199 40 21867889 21872806 hybridization