Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1143 ATGGACATAGCTCTCTTCTCTCCATCATCGCTCTTCTCCGAAGGAGACGGAGAGGAAGATCTCGTTTCTACTGGCAAGGAAAACACTGACAATCAAGACAGCCATGTAGAGAGGAGGCACCAGTTTCCTGGAATAGAGTTGATTATCAGAGAATTTTCCTTTCATCAACTGAATGCTAATTTGCTCTGGCCGGGGACATTTGCATTTGCAGAATGGTTAGTTCAAAACAAGTCATGCATTGAAGGACGGCACATCATTGAATTGGGAAGTGGCACAGGTGCTTTGGCCATATTTCTTCAAAAGTCATTTCATCTTGATATTACAACATCTGACTATGACGATATAGAAATTGAGGAGAACATAGCTCACAACTGCAGAGTGAATAAAATATCAGCCATTCCTCATGTAAGGCATACCTGGGGAGACAAGTTTCCGAATTCATCTCCTGACTGGGATTTGATCATTGCAAGTGATATCTTATTGTATGTGAAACAGTATGCAAATTTGATACAGACTATTTCCTTTCTTCTCAAATGTTACAAACCGAGCAAAGGAACATCATCTTGTCCTCCAAATGAGAATGGAGATATGGTGTTACCAAAGCCAGCTTTTCTGATGAGCTGGAGACGGCGAATTGGAAAGGAAGACGAATCTCTTTTCTTCAATGGTTGTGAGGGTGCTGGTCTGGAAGTGCAGCATATGGGATCTCGCGTATATTGCATCAAGCCTCGAGAAAATGAGAAATCAGAGACATGA 756 0.418 MDIALFSPSSLFSEGDGEEDLVSTGKENTDNQDSHVERRHQFPGIELIIREFSFHQLNANLLWPGTFAFAEWLVQNKSCIEGRHIIELGSGTGALAIFLQKSFHLDITTSDYDDIEIEENIAHNCRVNKISAIPHVRHTWGDKFPNSSPDWDLIIASDILLYVKQYANLIQTISFLLKCYKPSKGTSSCPPNENGDMVLPKPAFLMSWRRRIGKEDESLFFNGCEGAGLEVQHMGSRVYCIKPRENEKSET 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1143 251 Gene3D Vaccinia Virus protein VP39 35 249 IPR029063 -
Lele40g1143 251 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 26 232 IPR019410 -
Lele40g1143 251 Pfam Lysine methyltransferase 46 178 IPR019410 -
Lele40g1143 251 MobiDBLite consensus disorder prediction 1 35 - -
Lele40g1143 251 MobiDBLite consensus disorder prediction 19 35 - -
Lele40g1143 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 178 IPR029063 -
Lele40g1143 251 CDD AdoMet_MTases 85 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1143 Lele-ChrLele40 21503872 21507397 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1307 37 22148630 22155305 Lele40g1143 40 21503872 21507397 hybridization
Lele38g1201 38 23003985 23007515 Lele40g1143 40 21503872 21507397 hybridization