Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0915 ATGTCTCGACCCCCAAATCGCGAGTTTCAGGAATGGTGGAACAAGCAGCGAGCTACGGGCCATGATCTTCTTGACGACAAATCCGACGGCTCTACTCGCTCTTTTCTCACCGTCGACATACAAACCGTCCCTTCCGATCAAGAGTCGGTGGAGAAGGAGCGTGTCCGTAGTGCCCGCCAGCTTTCCTGGCTGTGCCTTTTGAGATTCCAGCAAATCGCGAGCTTTCTTGCTTGGCTGTCCAATGGCTTTCTCTCATTGCTCCGAACCGCCAATCGCAGGATTGCTTCGCCGGATTCGCTTTCCGATTCTAAGTCCAGGCTTTATCGTGTAATCAAGGTGTTCTTGATTGTCGTTCTCCTTTTGCTCGTGTTTGAGCTCGTTGCTTACTTCAAGGGATGGCATTTCAGCCCACCGACGGCCCATGCCGACGTTTATGGAATGATTGGTCTTGTTTATGCGAAATGGCTTGAGATTCGGGCAGATTACTTGGCACCGCCGTTGCAGAGCTTAACCAACATGTGCATTGTGCTCTTCTTGGTACAGTCGATTGATAGAGTGATTTTAATCTTGGGATGCTGCTGGATCAAATTCCGGCGTTTGAAACCTGTGGCCCCCATGGAGTGTCCAGCAAATGCTAAGAATGAGGATGTGAATGTCGAGGATTATCCAATGGTGTTAGTTCAGATTCCCATGTGCAATGAGAGGGAGCTCAAGCATTGGGGTATTACTAATCGTTCTGACTGGGTCTATCAGCAATCTATTGCTGCTGTTTGTATCCTGGATTGGCCAAAGGATAGAATGCTTGTACAGGTCCTTGATGATTCTGATGAAGTAGACGTCCAACATCTAATCATGGCAGAAGTACAGAAATGGCAACAGAGGGGTGTGCGAATACTATATAGACATCGTCTGATACGTACAGGCTATAAGGCAGGGAATCTTAAATCAGCAACGAATTGTGATTATGTTAAAGAATATGAGTTTGTGGCAATATTTGACGCTGATTTTCAACCAGCACCAGATTTCTTAAAAAGGACAATACCTCATTTTAAGGGAAGAGATGATTTGGCATTGGTCCAGACAAGATGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGACTGCAGAACATAAACTTATCTTTCCATTTTGAGGTTGAGCAACAGGTCAATGGCGTGTTCCTTAACTTTTTTGGTTTCAATGGAACTGCCGGTGTGTGGAGAATAAAGGCTCTTGAGGAGAGTGGTGGTTGGTTGGAACGAACTACTGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTCTGTGGATGGAAGTTCATCTTTCTAAATGACGTGAAGTGCCTTTGTGAACTTCCTGAGACCTATGAGGCGTATAAGAAACAGCAACACCGCTGGCATTCTGGTCCAATGCAATTGTTTCGTTTGTGTTTTGTTGATATACTTCGTTCAAAGAATGGACAGCCGCATCAAAATATCCTCTGCTTGCTATTGGTGCATTGGGCAAACTTAGCCTCTGTTCTGGCTTGGGACCTGAGGGAGCTCCTAATCAATCTGTTTTATGTTTTTGAAAAGGACCTACAAAGGAAGCTTATTCTGCCATTTTATTCATTCACCCTCTTTTGCATCATTCTTCCATTGACAATGTTTCTTCCGGAAGCTGAGCTGCCGACCTGGGTGGTTTGTTACGTACCTGGAGTCATGTCTATTCTAAGTATTCTTCCATGTCTCCATGCATTTCCATTTATAGTGCCTTACCTCCTATTCGAGAATACTATGTCAGTGACTAAATTCAATGCTATGATGTCGGGATTATTTCACTTTGGAAGTTCTTATGAGTGGGTGGTTACGAAAAAATTGGGAAGATCATCAGAGACAGATCTGGTTGCTTTTGAGAAGGAATCTGACCCTCTAATGAGATCTACCAGTCTTCACAGATCATCTTCAGATTCAGGCATTGAAGAGCTAAGCAAACTAGATTTGTCAAAGAAAACAGGGGGGAAAACAAGTCAGTTGACTTCCAGGCTTGAGATTTTTTGTGTGGATTCAAAACGTATATCTTATGGGGATATGAATGAAGGTCAGAATGGCCAAATCTCATTCATCCCATTTGGACACATTGATTGA 2130 0.4404 MSRPPNREFQEWWNKQRATGHDLLDDKSDGSTRSFLTVDIQTVPSDQESVEKERVRSARQLSWLCLLRFQQIASFLAWLSNGFLSLLRTANRRIASPDSLSDSKSRLYRVIKVFLIVVLLLLVFELVAYFKGWHFSPPTAHADVYGMIGLVYAKWLEIRADYLAPPLQSLTNMCIVLFLVQSIDRVILILGCCWIKFRRLKPVAPMECPANAKNEDVNVEDYPMVLVQIPMCNERELKHWGITNRSDWVYQQSIAAVCILDWPKDRMLVQVLDDSDEVDVQHLIMAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSATNCDYVKEYEFVAIFDADFQPAPDFLKRTIPHFKGRDDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDILRSKNGQPHQNILCLLLVHWANLASVLAWDLRELLINLFYVFEKDLQRKLILPFYSFTLFCIILPLTMFLPEAELPTWVVCYVPGVMSILSILPCLHAFPFIVPYLLFENTMSVTKFNAMMSGLFHFGSSYEWVVTKKLGRSSETDLVAFEKESDPLMRSTSLHRSSSDSGIEELSKLDLSKKTGGKTSQLTSRLEIFCVDSKRISYGDMNEGQNGQISFIPFGHID 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0915 709 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 213 451 IPR029044 -
Lele40g0915 709 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 151 636 - -
Lele40g0915 709 FunFam probable xyloglucan glycosyltransferase 5 215 453 - -
Lele40g0915 709 Pfam Glycosyl transferase family group 2 329 551 IPR001173 -
Lele40g0915 709 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 480 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0915 Lele-ChrLele40 19726400 19732868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0915 1 679 Miscellaneous Gene Families AT3G07330 68.814 0.0 918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1094 37 20652995 20658697 Lele40g0915 40 19726400 19732868 hybridization
Lele38g0974 38 21344542 21345204 Lele40g0915 40 19726400 19732868 hybridization