Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0756 ATGGCTTCCTCTCCCTCTGCATCATCTGCCTCCTCCTCAAGATCCACAATGTTCTACTATGGTGGATTCGAAGATCACTACGACGAGCCGCACTTCCTCGAAGCTTGCTTCCTCTGCCGGAGACCCCTCGGTCTTAATAGAGACATCTTCATGTACAGAGGGAACACACCGTTCTGTAGCAAAGAGTGCAGACAAGAACAGATAGAAATCGATGAGTCGAAGGAGAAAAGCTGGAAGGTTTCATCGAAAAGAAGTGTGAGACAATCTGAGTCAAATCAGAACTCCACACCGAGTAAGGCTGTAAGAACCGAAACTGTTGCTGTGGCCTGA 330 0.4818 MASSPSASSASSSRSTMFYYGGFEDHYDEPHFLEACFLCRRPLGLNRDIFMYRGNTPFCSKECRQEQIEIDESKEKSWKVSSKRSVRQSESNQNSTPSKAVRTETVAVA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0756 109 MobiDBLite consensus disorder prediction 84 102 - -
Lele40g0756 109 ProSiteProfiles Zinc finger FLZ-type profile. 31 75 IPR007650 -
Lele40g0756 109 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 23 109 IPR044533 -
Lele40g0756 109 MobiDBLite consensus disorder prediction 79 109 - -
Lele40g0756 109 Pfam zinc-finger of the FCS-type, C2-C2 25 74 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0756 Lele-ChrLele40 17826068 17826623 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0756 40 17826068 17826623 Lele40g0756 40 17826068 17826623 ECH
Lele37g0880 37 18617058 18617609 Lele40g0756 40 17826068 17826623 hybridization
Lele38g0813 38 19832145 19832700 Lele40g0756 40 17826068 17826623 hybridization