Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0748 ATGACGACCATGGAGAGCTTGATTGGGTTAGTGAACCGCATCCAGAGGGCTTGTACTGTGCTCGGTGACTATGGAGGTGGTGACAACACGTTTTCTTCTCTCTGGGAAGCTCTTCCTTCCGTTGCTGTCGTCGGTGGTCAGAGTTCTGGGAAGTCTTCCGTTTTGGAGAGTATTGTTGGTCGTGATTTCCTTCCCAGAGGGTCAGGGATTGTGACGAGACGTCCTCTGGTGCTGCAGCTTCATAAGACGGATGAAGGATCGCAAGAATATGCCGAATTCCTTCACTTGCCAAGGAGAAAGTTCTCTGACTTTGCCCTGGTTCGCCAGGAAATTCAGTATGAAACTGAAAGAGTCACTGGAAAGAACAAACAAATATCTCCTATTCCAATTCATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACCTTGATTGATTTACCGGGTTTGACCAAAGTTGCTGTAGAAGGACAGCCTGAGACTATTGTTCAAGACATTGAAATGATGGTTCGATCTTATATTGAGAAGCCTAATTGCATTATACTAGCAATATCTCCAGCCAATCAAGACATAGCAACTTCTGATGCTATTAAGATTTCGAGGGAAGTGGATCCCACAGGTGAACGGACATTTGGGGTGCTGACAAAATTGGATCTGATGGATAAAGGAACAAATGCATTGGAAGTCCTAGAAGGAAGATCTTACCGCTTACAACATCCTTGGGTAGGTATTGTGAATCGATCCCAAGCAGATATCAATAAAAATGTTGATATGATTGCTGCTAGACGCAAGGAGCGTGAGTACTTTGCATCCAGTGCTGACTATGGCCACTTAGCCAATAAAATGGGTTCAGAGTATCTTGCAAAACTTCTATCTCAGCACTTGGAGTCAGTAATCAGGGCACGGATACCTAGTATAACATCTTTGATAAACAAAAGCATTGATGAACTGGAATCAGAGATGGATCATCTTGGGAGACCTATTGCACTTGATGCTGGGGCTCAATTATACACCGTACTGGAAATGTGCCGAGCATTTGATCGGATATTCAAGGAGCATTTAGATGGCGGGCGACCTGGAGGAGATAGGATATATAATGTCTTCGATAATCAGCTGCCTGCTGCTTTACGGAAGCTCCCATTTGACCGGCACCTTTCTATTCAGAATGTTAGGAGAGTGGTATCAGAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCGGAGCAAGGTTATCGGCGCTTGATTGAGGGGTCTCTCAATTACTTTAGAGGCCCAGCTGAAGCTTCAGTTGATGCTGTTCACTTTGTGTTAAAAGAACTTGTGAGAAAATCGATAGCCGAATGTCAGGAACTGAAGCGTTTTCCAACTCTTCAAGCTGAAATAGCTGCAGCTGCAAATGAGGCTTTAGAAAGATTCCGTGAAGAGAGTAAGAAGTGTACTATTCGGCTTGTTGACATGGAATCTTCTTACCTGACCGTAGATTTCTTCCGGAGACTTCCACAAGAAATTGAGAAAACTGGAACTGGAAATACTGCTGCTACTGCTGCACCAGCTGTGGATCGTTATTCAGAGGGCCATTTCAGGAGGATTGCGTCAAACGTGTCATCCTACATAGGTTTGGTGGCAGATACCCTCAGGAACACCATTCCTAAGGCTGTTGTTTATTGTCAGGTCAGAGAAGCAAGACATTCCCTGCTAAACCATTTCTACATACAAATAGGGAAGAAAGAGGGCAAGCAGCTATCACAGTTGTTAGATGAAGACCCTGCATTAATGGAGAGGAGACTACAATGTTCAAAAAGGCTTGAACTGTACAAAGCAGCAAGGGATGAAATTGATTCTGTCTCATGGGCACGATGA 1860 0.4425 MTTMESLIGLVNRIQRACTVLGDYGGGDNTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDEGSQEYAEFLHLPRRKFSDFALVRQEIQYETERVTGKNKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIVQDIEMMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFASSADYGHLANKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIDELESEMDHLGRPIALDAGAQLYTVLEMCRAFDRIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPFDRHLSIQNVRRVVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLKELVRKSIAECQELKRFPTLQAEIAAAANEALERFREESKKCTIRLVDMESSYLTVDFFRRLPQEIEKTGTGNTAATAAPAVDRYSEGHFRRIASNVSSYIGLVADTLRNTIPKAVVYCQVREARHSLLNHFYIQIGKKEGKQLSQLLDEDPALMERRLQCSKRLELYKAARDEIDSVSWAR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0748 619 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
Lele40g0748 619 Pfam Dynamin central region 225 492 IPR000375 -
Lele40g0748 619 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 304 IPR030381 GO:0005525
Lele40g0748 619 PANTHER DYNAMIN 5 615 IPR022812 -
Lele40g0748 619 Gene3D Dynamin, middle domain 330 586 - -
Lele40g0748 619 ProSiteProfiles GED domain profile. 527 619 IPR020850 -
Lele40g0748 619 FunFam dynamin-related protein 1E 4 313 - -
Lele40g0748 619 Gene3D - 4 313 IPR027417 -
Lele40g0748 619 SMART dynamin_3 4 255 IPR001401 GO:0003924|GO:0005525
Lele40g0748 619 Pfam Dynamin GTPase effector domain 523 615 IPR003130 GO:0003924|GO:0005525
Lele40g0748 619 PRINTS Dynamin signature 228 247 IPR022812 -
Lele40g0748 619 PRINTS Dynamin signature 63 80 IPR022812 -
Lele40g0748 619 PRINTS Dynamin signature 38 56 IPR022812 -
Lele40g0748 619 PRINTS Dynamin signature 205 221 IPR022812 -
Lele40g0748 619 PRINTS Dynamin signature 136 153 IPR022812 -
Lele40g0748 619 PRINTS Dynamin signature 186 204 IPR022812 -
Lele40g0748 619 Pfam Dynamin family 41 216 IPR045063 -
Lele40g0748 619 FunFam Dynamin-related protein 1C 335 595 - -
Lele40g0748 619 SMART GED_2 522 615 IPR003130 GO:0003924|GO:0005525
Lele40g0748 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 312 IPR027417 -
Lele40g0748 619 CDD DLP_1 38 304 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0748 Lele-ChrLele40 17734228 17741312 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0748 40 17734228 17741312 Lele40g0748 40 17734228 17741312 ECH
Lele37g0874 37 18540359 18545774 Lele40g0748 40 17734228 17741312 hybridization