Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0716 ATGATATTGGTGCCGTGGATTGGGCATAGCCTATATTCTCTGACATGGAGTGAGCGACACCCATTTTACTATTTGATATTCCCATTTCTTTTTCTGAGACTTCTTCACAATCAGATTTGGATCTCTGTTTCTCGTTATCTAACTGCTAAAGGCTCCAACCGAATCATTCACAAAGGCCTTGAGTTCGATCAAGTTGACAGAGAAAGTAACTGGGATGACCAGATTTTGCTAAATGGACTGCTGATGTACTTAGTATACATCATATTTCCTCATGTTTCTCATCGCTTATTACTTTGGAGAACAGATGGTGTGATTCTCACAGCTTTATTGCATGCTGGTCCTGTGGAGTTTCTTTATTATTGGCTTCACAGAGCTCTTCATCACCATTTCCTCTATTCTCGCTATCATTCTCACCATCATTCTTCCATTGTCACTCAGCCTATATCTTCCGTGATTCATCCGTTTGCTGAAGTTGTGGCATATGTCGCGTTATTCACAATCCCAATATTTGCGACATTGTTCACAAGAACTATGTCCATAGCCTCCGTACTTGGTTACATATTTTACATCGATTTCTTGAACAACTTGGGTCATTGCAACTTTGAGTTCTTTCCCAAGAATCTCTTCTCTCTCTTTCCCTTGTTTAAGTATCTCTGCTACACGCCCTCGTTTCATTCACTGCATCACACCAAATTCAGGACAAACTACTGCCTTTTCATGCCCTTATATGACTATATCTATGGCACTGTGGATGAATCCACAGATGAAACATATGAAACATCATTGAAGGGATCAAGAGATTCTCCAGATGTGGTTCATTTGACACACCTAACAACCTCGGATTCTATCTATCATCTTCCATTAGGATTTGCTTCTTTAGCCTCCAACCCTCAAACATCAAAATGGTATCTTTGGTTGATGTGGCCCTTCACAATTGTTTTTATGGTAAAAGCTTGCATGTATGACCGTACCTTTGTCTCAGAAAGGAACACTTTCGAAAAGCTCAGTTTGCAATCATGGGTTGTACCACGATTTACTCAACAATATCCATTAAAAAGGCAGAGAAAAAGTCTGAACAAGATAATAGAAGAGGCACTTCTTGAGGCCGATTCATTGGGCGTTAAAGTGCTTAGTCTGGGGCTTCTAAATCAGAAGTTTCCAAAACTAAATGTAAAGGTTGTAGATGGAAGTAGCTTAGCTGCTGCTATTGTTGTGAACAACATTCCCAAAGAGACGAAGCAGGTGGCTACATTATATCAAGATGAGCTAACAAAGCTTCATCCGAGATCCAACGCCACAAAGTCAAAAGAAAGTTTTGCTCTTTCAACAACTAATTATGAGCACAAGATATGGTTAGTGGGAGATGGATGGGATGAAGATGAACAGATGAAAGCACCAAAAGGAACATTATTCATACCATTTTCTCAATTCCCACCCAAAAAAATGAGAAAAGATTGCTTCTACCACTATACTCCTGCAATGATGGCTCCTCCTTCAGTCAAGAACTTGCATTCTTGTGAGAATTGGCTGCCAAGAAGAGCAATGAGTGCATGGCGTATAGCAGGAATAGTACACGCCTTAGAAGAATGGAATGTTCATGAGTGTGGCTCTTCCACTTTTAGTCTCCCTCAAATTTGGGATGCCACTCTTCGTCATGGTTTCAAACCTTTGGACGCTCCTTCTTAA 1686 0.4033 MILVPWIGHSLYSLTWSERHPFYYLIFPFLFLRLLHNQIWISVSRYLTAKGSNRIIHKGLEFDQVDRESNWDDQILLNGLLMYLVYIIFPHVSHRLLLWRTDGVILTALLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTQPISSVIHPFAEVVAYVALFTIPIFATLFTRTMSIASVLGYIFYIDFLNNLGHCNFEFFPKNLFSLFPLFKYLCYTPSFHSLHHTKFRTNYCLFMPLYDYIYGTVDESTDETYETSLKGSRDSPDVVHLTHLTTSDSIYHLPLGFASLASNPQTSKWYLWLMWPFTIVFMVKACMYDRTFVSERNTFEKLSLQSWVVPRFTQQYPLKRQRKSLNKIIEEALLEADSLGVKVLSLGLLNQKFPKLNVKVVDGSSLAAAIVVNNIPKETKQVATLYQDELTKLHPRSNATKSKESFALSTTNYEHKIWLVGDGWDEDEQMKAPKGTLFIPFSQFPPKKMRKDCFYHYTPAMMAPPSVKNLHSCENWLPRRAMSAWRIAGIVHALEEWNVHECGSSTFSLPQIWDATLRHGFKPLDAPS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0716 561 Pfam Fatty acid hydroxylase 115 249 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lele40g0716 561 Pfam WAX2 C-terminal domain 399 556 IPR021940 -
Lele40g0716 561 PANTHER STEROL DESATURASE 2 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0716 Lele-ChrLele40 17150712 17156245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0716 9 557 Lipid Metabolism Gene Families AT1G02190 54.637 0.0 610
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0716 40 17150712 17156245 Lele40g0716 40 17150712 17156245 ECH
Lele37g0872 37 18513629 18519213 Lele40g0716 40 17150712 17156245 hybridization
Lele38g0777 38 19320375 19328918 Lele40g0716 40 17150712 17156245 hybridization